Lentibacillus sp. CBA3610: Len3610_04830
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Entry
Len3610_04830 CDS
T08606
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lex
Lentibacillus sp. CBA3610
Brite
KEGG Orthology (KO) [BR:
lex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lex03032
]
Len3610_04830 (topA)
03400 DNA repair and recombination proteins [BR:
lex03400
]
Len3610_04830 (topA)
Enzymes [BR:
lex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Len3610_04830 (topA)
DNA replication proteins [BR:
lex03032
]
Prokaryotic type
DNA Topoisomerases
Len3610_04830 (topA)
DNA repair and recombination proteins [BR:
lex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Len3610_04830 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_3
Zn_ribbon_RPAB4
Motif
Other DBs
NCBI-ProteinID:
QKY69021
UniProt:
A0A7H8S3I8
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All DBs
Position
955314..957392
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AA seq
692 aa
AA seq
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MSDYLVIVESPAKAKTIKRYLGKNYKVKASMGHVRDLPKSQTGVDPDDSFKPKYITIRGK
GDVLKELKSAAKKAKKVYLAADPDREGEAIAWHLAYALNVDEDSECRVVFNEITKDAIKE
SFKNPRSIDYDLVDAQQARRILDRLVGYKISPLLWKKVKRGLSAGRVQSVAVKMIIDREK
EIENFKPEEYWSIDAHFQKDDDVFEGSFYGIDGKKQELKSEEDVKAITDRLDGKQFSIDK
VNKRERRRNPAKPFTTSSLQQEAARKLNFRAKKTMMVAQQLYEGIDLGKKAGGITGLITY
MRTDSTRISETAKQEAKSYIEDNYGKNYLGYPGKAKQQEGAQDAHEAVRPTSAMRDPKSL
KEVLPRDQLRLYKLIWERFLASQMAPAVMDTMTVHLLNNGAEFRATGSKVKFKGFMKVYV
EGTDDKKKDDNKYLPDLSEGMVVEAKDIKPNQHFTQPPPRYTEARLVRTMEERGIGRPST
YAPTLDTIQRRGYVQLDSKRFVPTELGTIVTDILKEFFPRIVDLEFTVKMEEDLDAVEEG
KTEWIKVLDEFYGGFRKRLERAEEEMEKVEIRDEPAGITCENCGHEMVYKMGRYGKFLAC
SNFPECRNTKPILKKIGVTCPKCKEGNVVERKSKKNRKFFGCDRYPECDFVSWDKPVSRP
CPKCESLLVEKKTKKETRVQCTNCDYKESAEN
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattacctggtgatcgtggaatcgccggcgaaagcgaaaacgatcaaacgttat
ttgggaaaaaattataaagtaaaagcttcaatgggtcatgtgcgtgatttgcccaaaagt
caaacgggtgtcgatccggatgactcatttaaaccaaaatatattacaatccgaggcaaa
ggtgatgtacttaaggaattaaagtcagctgcaaaaaaggctaaaaaagtttatcttgct
gctgaccctgacagggaaggcgaagcaattgcctggcatttggcatacgctttaaacgtt
gatgaagattctgaatgccgggtggttttcaacgagattacaaaagatgcgattaaagaa
tcgtttaaaaacccgcgttcgattgattatgatttggtggatgcccagcaagccagacgt
atcctcgatcgtcttgttggttataagataagcccgctgctatggaagaaagtcaaaaga
ggtttaagtgctggaagagttcagtcggtagcagtcaagatgatcattgatcgcgaaaag
gaaattgagaatttcaaaccggaagaatactggtccattgatgctcatttccaaaaagac
gatgatgtatttgaaggatctttttacggtattgatggtaaaaagcaagaactgaagtct
gaggaagatgttaaagcgattacggaccgattggatggcaagcaattttcaattgataag
gtgaacaaacgcgagcgcagacgcaatcctgccaaaccgttcacgacgtcatcactgcag
caggaagcagcacggaaacttaattttcgagccaaaaaaaccatgatggtagctcagcag
ttatatgaagggattgatttgggcaaaaaagcaggtggaatcaccggtttaatcacttat
atgcgtacggactcaacaaggatttcagagacggccaaacaagaagctaaaagctatatt
gaggataactatggcaaaaactatttgggctatcccggaaaagccaagcagcaggagggt
gcccaggatgcccatgaagcagtaagaccgacatctgctatgcgtgacccgaaatcattg
aaagaagtattgccacgcgatcaacttcgtctttataagcttatctgggaacgttttctg
gcaagtcaaatggcgccggccgtcatggatacgatgactgtccatttacttaataatgga
gccgaattccgtgcaactggttcaaaagttaaatttaaaggctttatgaaagtatatgtc
gaaggtaccgatgataagaaaaaggatgataataagtatttacctgacttgtctgaaggt
atggttgtggaagctaaagatatcaaaccaaatcagcacttcacgcagccaccccccagg
tatactgaagcaaggctggtccgcaccatggaagaacgggggattggacggccttcaacg
tatgcgcctacgcttgatacgattcagcgcagaggatacgttcaattggacagtaagcgg
tttgtcccgactgagttgggtaccattgttactgatatattgaaggaatttttccccaga
atagttgatcttgaatttacagtaaaaatggaagaggatcttgatgccgttgaggaaggg
aaaactgaatggatcaaggtactggatgaattttatggcggatttcgaaaacgcctggag
cgagcggaagaagaaatggaaaaggttgaaatccgcgacgaacctgctggtataacatgt
gaaaattgtggacatgaaatggtttataaaatgggaagatacggtaaattcctggcttgt
tccaattttccggaatgccgaaatacaaaaccgattttaaagaaaatcggcgtcacatgc
ccgaaatgtaaagagggcaatgttgtcgaacgaaaatcaaagaaaaaccgaaaatttttc
gggtgtgaccgttatccggaatgtgattttgtttcatgggataagccggtttcaagaccc
tgtccgaaatgtgaatcattactcgtcgaaaagaaaacgaaaaaagaaacgcgagttcaa
tgtacgaactgcgattataaagaaagtgccgaaaactga
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