Lentibacillus sp. CBA3610: Len3610_06030
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Entry
Len3610_06030 CDS
T08606
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lex
Lentibacillus sp. CBA3610
Pathway
lex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Len3610_06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lex03019
]
Len3610_06030
03400 DNA repair and recombination proteins [BR:
lex03400
]
Len3610_06030
Enzymes [BR:
lex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Len3610_06030
Messenger RNA biogenesis [BR:
lex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Len3610_06030
DNA repair and recombination proteins [BR:
lex03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Len3610_06030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Helicase_C_2
AAA_22
HJURP_C
Motif
Other DBs
NCBI-ProteinID:
QKY71618
UniProt:
A0A7H8SCG6
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All DBs
Position
complement(1184723..1186273)
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AA seq
516 aa
AA seq
DB search
MILLKDKVQEQLRKQFHISSFRSGQEEIIDDIMNGNDVLGILPTGSGKSLCYQLPATLFD
GVTIVVSPLISLMEDQVKQLKATGFKKVVALNSFMRPDERTRVFQQLNQFKLIYLSPELL
QQSDMIERLRQVKIDVFVIDEAHCISQWGHEFRPDYLRLGTVLRKLNGPTVLALSATATM
EVQNDIINALDRPDIKRHIHPMDRENITFMVEKVNGDKDKQDVLTNILKQNRVPALIYFS
SKRKTEEIAAYISETLPSQRVAFYHGDMDQLDRITIQQQFMNDQLDIICCTSAFGMGINK
RNIRLVLHYHFPLQIESFLQEIGRAGRDGQSSVSLLLYSPGDEMIQGTIIENELPVKEEL
NNIFNKLYQLYINSPQLPPLNQLLDALRLNEVQWRFLHYQMEQHGIIKKNCLVYDKSEWE
KSIQKIGRFIETRSALKGRKLHEMINWIHEENCLRDSLYKSFQEHYKTPLYACCSNCGFS
FEHWEPAQTQNDQEAISWKTKLKKLLLNEDYEFETE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
attattttgttaaaagataaagtgcaggagcaactaaggaaacaatttcatatttcctca
tttcggtcaggacaggaagaaatcatagacgacatcatgaacggaaacgatgtgttgggc
attctcccgaccggttcagggaaatccctctgctaccagctgcccgcaaccctgtttgat
ggcgtgacaattgttgtgtcgccgttaatttcattaatggaggatcaggttaaacagtta
aaagcaacagggtttaaaaaagttgtggcgttaaacagttttatgagacctgatgaaaga
acgcgtgttttccagcaattgaatcagtttaagttaatttatctttcgccggaactcctg
cagcaaagtgacatgatcgagcggctgaggcaagtcaaaattgatgtattcgttatagat
gaggcgcactgcatttcacagtggggacacgaattcagacctgattatttaaggcttggc
accgttctcaggaaattaaatggtccaactgtattggcattaagcgcgacagcaacgatg
gaagtgcagaacgatatcattaacgcattggacaggcctgatattaaaaggcatattcac
ccgatggacagggaaaatataacgttcatggtagaaaaggtaaatggggacaaggataag
caggatgtactgacaaatattttaaaacaaaatcgcgtacctgctttgatttatttttcc
agcaaacgaaaaacagaagaaattgctgcatacatatctgaaacacttccttctcagcgt
gttgcattttatcatggtgatatggaccagttagacagaattacgattcagcagcagttc
atgaatgaccaacttgatatcatctgttgtacaagtgcgtttggaatgggaattaataaa
cggaatatccggctggttttacattatcattttcctttgcaaatcgagtcttttctccag
gaaatcggcagagccggacgtgatggccaatcaagtgtcagtttgttattgtattccccg
ggggatgagatgattcagggcaccattattgaaaatgagttaccggtaaaagaagaactg
aacaatatctttaataagctatatcagctatacataaacagcccgcaattgccgccatta
aaccaattgctcgacgcattacggctaaatgaggttcagtggcgatttttgcactatcaa
atggagcaacatggtataattaagaaaaattgtctggtttacgataagagcgaatgggaa
aagtccattcagaaaattggtcgctttattgaaacacggtcagctttaaaaggaagaaag
ctccatgaaatgattaattggattcatgaagaaaattgtttacgcgattcactttataaa
agttttcaggaacactacaaaacaccgctgtatgcctgctgcagcaattgcgggttttca
tttgaacattgggaaccggcacaaacgcaaaacgatcaggaagccatttcatggaagacc
aaattaaaaaaattactgctcaatgaggattatgaatttgaaacagagtga
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