Lentibacillus sp. CBA3610: Len3610_08720
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Entry
Len3610_08720 CDS
T08606
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lex
Lentibacillus sp. CBA3610
Pathway
lex03030
DNA replication
lex03430
Mismatch repair
lex03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Len3610_08720
03430 Mismatch repair
Len3610_08720
03440 Homologous recombination
Len3610_08720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lex03032
]
Len3610_08720
03400 DNA repair and recombination proteins [BR:
lex03400
]
Len3610_08720
Enzymes [BR:
lex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Len3610_08720
DNA replication proteins [BR:
lex03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Len3610_08720
DNA repair and recombination proteins [BR:
lex03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Len3610_08720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QKY69669
LinkDB
All DBs
Position
complement(1715130..1718492)
Genome browser
AA seq
1120 aa
AA seq
DB search
MSFTHLQVHSGYSFLNSTITVDKLAAKAHELQFDALALTDEHVLYGAIPFYKACQQNGIK
PIIGMSAKVTNDDEEPDACILLAKNNQGYQNLIKLSTHIQVSQKNSIEKSDLTFYSNDLI
CILVTSDSKAGTLLLDGPYDQVKEYLDATWHMFDREDFYMGVQDHGMQEERNINQSIKAF
NEIYQTKAVLLNDVRYLNEKDDIAFDCLRAMKHNKKWPLRITNSAVKQRHLRSAVEMEQL
FINDWPEIIHETSVIAEKCRVSFDFDQRMLPSYPVPEAMDAHTYLERICRENVRQKYDVV
TEEVEERLAYELDIIQSMQFSDYFLIVWDFIAYAKEQTILVGPGRGSAAGSLVAYVLGIT
EVDPIQYDLLFERFLNPERVSMPDIDIDFSDNRRDDVIDYVRDKYGHAHVAQIITFGTFA
ARSLLRELIKTMDVDQQDAYFILKEIPVQASQPIAAYVKNSEDLQQYIKQSEKLKALFTI
AAKLEGLPRHLSTHAAGVVISEEPLEELVPLTAGTHDTYLTQYAMNDLEAIGLLKMDFLG
LRNLTLLERILRTIRYTRKRTITLADIPEEDVPTYKLLQKGRTNGVFQLESQGMKQVLTR
LKPTTFEDIVAVNALFRPGPMENIPVYIDRKHGTEKVEYPHPDLEPILEKTYGVLIYQEQ
IMQIAHKIAGFSLGQADILRRAVSKKQQNVMTEQKAAFIQGCVANGYTESVAEEMFQWIV
KFSNYGFNRSHAVAYSKISYQLAYLKTHYPASFFAELMSSAGTQQDKTNMYMKELKTHGL
ELAPPSINKSFGKYSVENEQIRMGFLSIKGIGNQVVNEIIDVRKDGPFKSLFDFCLRVSL
TVINRRTLEILIMAGAFDELYDNRASLLASIDQALEQGELFKEFSEQSSLFHDILELEES
YVPIEDFTLMKKLSDEKELLGIYVSSHPLNKYRNILKAKGYVSMSDAPKMAGKRNLNSTG
IVQAIKTIRTKRGDPMAFLTIGDETGDMEAVVFPDLYRDVHRWLAEEMLVTFTGKVESRN
NQFQWLMSTIALFDEQDFQVDQNQRLFIKITAENSKNALAVIKNTAEKNPGQTPIIIYNQ
QERSTYKLSYAYLVHPDEACLQSLRNYFGSGNVVLDTIKA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttacacatttgcaagtccacagcgggtatagtttcctgaacagtaccattact
gttgataaattggccgcgaaagcgcatgaactgcaatttgatgcactggcattaacagat
gaacatgttttatatggtgctatcccattttacaaagcatgtcagcaaaatgggattaaa
ccgatcatcgggatgagtgcaaaggttacgaacgatgatgaagaaccggatgcttgtatt
cttctggctaaaaataatcaaggctatcaaaatttaattaagttaagtacacatattcaa
gtatctcaaaaaaacagcattgaaaaatcagatttgacattttacagtaacgatttgatc
tgtattttagttacatccgattcaaaggcggggactttattattggacgggccatatgat
caggtgaaggaatatttggatgcaacatggcatatgtttgaccgggaagatttttacatg
ggcgttcaggaccatggaatgcaggaagaacgtaacatcaaccagtccataaaagccttc
aatgagatttatcaaacaaaggccgtattattgaacgatgtccgttacctgaatgaaaaa
gatgatatcgcttttgattgtttacgtgccatgaaacataataaaaaatggccgcttcga
atcacaaattcagcggttaaacagcggcatttgcgatcggctgtggaaatggagcagctt
tttattaatgattggcctgaaatcattcatgaaaccagtgttattgcagaaaaatgccgt
gtaagctttgattttgatcagcgaatgctcccttcctaccctgttccggaagcaatggat
gcccatacatatcttgaaagaatatgccgggaaaatgtacggcaaaaatatgacgtggtc
acagaggaagtagaagagcgtcttgcctatgaattggatatcattcaatcgatgcagttc
agtgactattttttaattgtctgggatttcattgcttatgcaaaagaacaaactatttta
gtgggaccgggaagggggtctgcagcgggttcacttgttgcgtatgtgcttgggattacc
gaagttgacccgattcaatatgacttattattcgaaaggttcctgaatccggaacgtgta
tccatgcctgatattgatattgatttttctgataacaggcgggatgacgtgattgattat
gtccgtgataaatatggacatgcccatgttgcacaaattatcacgtttggtacgtttgct
gccagatcgctgttgcgtgaactcataaaaacaatggatgttgaccagcaagatgcttat
tttattttaaaggaaatccctgtccaggccagtcagccaatcgcagcatatgtgaagaat
tctgaagacctgcagcaatatatcaaacaatccgaaaagctgaaggccttatttacgatt
gccgcgaaactggaggggcttccaagacatctgtcaacacatgctgccggtgttgtcatt
agtgaggagccgcttgaagaactcgtcccgttgactgcaggtacgcatgatacatatttg
acacaatatgcgatgaatgacctggaagcaatcggattattgaagatggattttttaggg
ctgcggaacttaacattgcttgagcgaattttaaggactatccgttataccaggaaacgc
accattacgctagcggatattccggaagaagatgtccctacttataaactgttgcaaaaa
ggcaggacgaatggtgtttttcagttggagtcacagggcatgaaacaggtgctgaccaga
ttgaagccgaccacgtttgaggatatcgtggcggtgaatgctttgtttcgtccgggacca
atggaaaatataccggtttacattgaccggaagcatggaacagaaaaggttgaatacccg
catcctgacctggagcccattttggaaaaaacttatggtgttctgatttaccaggagcaa
attatgcaaattgctcataagattgccgggttttcattgggacaggccgatattttacga
cgggcagtaagcaaaaagcagcagaacgtgatgactgaacaaaaagctgcctttatccag
ggctgtgtggctaatggctacacggaatctgttgcagaagaaatgtttcagtggatcgtt
aagttttccaactatggttttaacagaagtcacgcggtcgcctacagtaaaatatcctat
cagcttgcttacctgaagactcattatcctgccagcttttttgctgaattaatgagttca
gcaggcacccagcaggataaaacgaatatgtacatgaaagaattaaagacacatggtttg
gaattggctcctccctcgattaataaaagctttggtaaatattcggtggagaatgagcaa
atccgaatgggttttttgtcaattaaaggtataggcaatcaagtcgttaacgaaataatc
gatgttagaaaagacggtccttttaagagtttgtttgatttttgtttacgtgtatcgctg
acagtgatcaaccgcagaacgctggagatactgattatggcaggcgcattcgatgagctt
tatgacaatcgtgccagtttgttggcatcaattgatcaagcacttgaacaaggtgaatta
tttaaggagttcagtgagcaatcaagcctgtttcacgatattcttgaattggaagaaagt
tatgtaccgatagaagatttcacactgatgaaaaagttgagtgatgaaaaagaactgctc
ggtatctatgtttccagccatccattaaacaaataccggaatatattaaaggcaaagggt
tatgtttccatgtccgatgcaccaaaaatggccggaaaacgaaacctgaatagtaccgga
atcgtacaagctatcaaaacgattcgaacaaaacgcggggatccgatggctttcctgacc
attggtgatgaaacaggcgatatggaagcagttgttttccctgatttgtacagggatgtt
caccgctggctggctgaagaaatgctcgtgacgtttaccggaaaggttgaaagtcggaat
aaccagtttcaatggttaatgtcaactattgctctgtttgacgagcaggattttcaggtt
gatcagaatcagcgtttatttataaaaataacagccgaaaatagtaaaaacgcgttagcc
gtcattaaaaatactgcagaaaaaaatccgggccaaacaccaatcattatttacaatcag
caggaaaggtcaacctacaaattatcatatgcttatttggttcatccggacgaagcatgt
cttcagtcattaaggaactatttcggttccggcaatgtcgtattggatacgataaaagca
taa
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