Lentibacillus sp. CBA3610: Len3610_13645
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Entry
Len3610_13645 CDS
T08606
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lex
Lentibacillus sp. CBA3610
Pathway
lex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Len3610_13645 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lex03021
]
Len3610_13645 (rho)
03019 Messenger RNA biogenesis [BR:
lex03019
]
Len3610_13645 (rho)
Transcription machinery [BR:
lex03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Len3610_13645 (rho)
Messenger RNA biogenesis [BR:
lex03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Len3610_13645 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
AAA
AAA_22
Spore_III_AA
NB-ARC
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QKY70492
LinkDB
All DBs
Position
complement(2788580..2789860)
Genome browser
AA seq
426 aa
AA seq
DB search
MASLTISHLETLTLKEIYALAREYKVSYYAKLTKKELIFSILKAQAEKDGYLFMDGILEV
IPSEGFGFLRPINYSPSAEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLHVDA
VNGVDPETSKERVHFPALTALYPDRFMQLERETKNLSTRIIDLMTPVGFGQRGLIVAPPK
AGKTVLLKGIANSISANHPHAKLIILLVDERPEEVTDIERSVHEDVDVVSSTFDEVPESH
IKVSELVLERAMRLVEHKRDVIVLMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKR
FFGAARNIEEGGSFTVLATALIDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPSID
ILKSGTRKEELLVSKDHLDKIWAIRKTMQDSHNFLDRFLKRLRSTKNNDEFFQQMEDEMK
RKGTKG
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcatccttaactatttcccatctggagacattaacgttaaaggaaatttatgctctg
gcacgggaatacaaagtatcgtattatgcaaaacttacaaaaaaagaactcattttttca
attctgaaagcacaggctgaaaaagacggttatttattcatggatgggattttagaagta
ataccttcagaaggatttggctttcttcgtccaatcaattattccccaagtgcagaagat
atttatatttccgcatcacaaatccgccgttttgatttaagaaatggggataaagtatcc
ggcaaagtacgtccgccaaaagaaaatgaacgttattacggcttgctgcatgttgacgca
gtgaacggggtggaccccgaaacgtcaaaagaacgtgtgcattttccggcactcacggca
ttatatcctgaccgtttcatgcaactggaacgcgagaccaaaaatttgtcgacccggatt
attgacctgatgacaccggttggctttgggcagcgcggactgattgttgcaccgccaaaa
gccggtaaaacagtgcttctgaagggaattgccaatagtatttcagcgaaccatccgcat
gctaaattgattattttactagtggacgagcgtcctgaagaagtaaccgacattgagcgt
tcggttcacgaggacgtggatgtcgtcagctccacttttgatgaggttccggaaagccat
atcaaagtttccgaacttgttctggaacgggcgatgcgtctggtggagcataagcgtgat
gtcattgtcctgatggatagcatcacacggcttgcccgtgcctacaatctggtcattccg
ccaagcggccggacactttccggcgggattgatccagcagcattccaccgcccgaaacgc
ttttttggtgcagcgcggaatatcgaagaaggcggcagttttaccgtcctggcgacggct
ttaattgacacgggttcccgaatggacgatgttatctatgaagagtttaaaggaacgggc
aatatggaactgcacttggatcgcagtctcgctgaacgccggattttcccatctattgat
atactgaaatccggtacacggaaagaggaattgcttgtctcgaaagatcatcttgacaaa
atctgggccatccggaaaacaatgcaggattcccataatttcctcgaccgcttcctgaaa
cgtctcagatcaacgaaaaataacgatgaattcttccagcaaatggaggatgaaatgaaa
cgtaagggaacgaaagggtag
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