Leclercia sp. W6: DVA43_00265
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Entry
DVA43_00265 CDS
T08905
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ley03009
]
DVA43_00265
Enzymes [BR:
ley01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DVA43_00265
Ribosome biogenesis [BR:
ley03009
]
Prokaryotic type
rRNA helicases
DVA43_00265
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AXF58101
UniProt:
A0AAD0PL91
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All DBs
Position
complement(47363..48691)
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AA seq
442 aa
AA seq
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MTVTTFSELELDESLLDALQEKGFTRPTAIQEAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAKNTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKDFAERLLEDPVEVSANPSTRERKKIHQWYYRADDIQHKTALLI
HLLKQPEATRSIVFVRKRERVHELATWLREAGINNCYLEGEMVQIKRNEAIKRLTDGRVN
VLVATDVAARGIDIPDVSHVFNFDLPRTADTYLHRIGRTGRAGRKGTAISLVEAHDHLLL
QKIGRYVEEPLKARVIDELRPSTRAPSEKMTGKPSKKVLAKRAEKKAKEKEKPRVKQRHR
DTKNVGKRRKPSGSAPVTQKEE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaacttgaactcgatgaaagccttctggacgcgctccag
gaaaaaggcttcacacgcccgaccgctattcaggaagcggcaattccgcctgcactggag
ggccgtgacgtgctcggttctgcgccaaccggcacgggtaaaacggcagcctatttgctg
cctgcgttgcagcatctgctggattttccgcgtaagaaatcaggtccgccgcgtattctg
atcctcaccccgacccgtgaactggcgatgcaggttgccgatcatgcgcgtgagctggcg
aagaacacccacctggatatcgcaaccattaccggcggtgtggcctatatgaaccatgcc
gaagtattcagtgagaaccaggatatcgtcgttgcgacgaccgggcgtctgctgcaatac
attaaagaagagaacttcgactgccgtgcggtagaaaccttaattcttgacgaagctgac
cgtatgctggatatgggctttgcgcaggatatcgaacacattgccggtgagacccgctgg
cgtaagcagaccatgctcttctccgcgacgctggaaggcgatgcgattaaagattttgcc
gagcgtctgctggaagatccggtcgaggtgtctgccaatccgtccacgcgtgaacgcaag
aagatccatcagtggtactaccgcgccgatgatattcagcataaaaccgcgctgctgatc
cacctgctgaaacagcctgaagccacccgctctatcgtctttgtacggaaacgtgagcgt
gtgcatgagctggcgacctggctgcgtgaagcgggtatcaataactgctatctcgaaggc
gagatggtgcagattaaacgtaacgaagcgatcaaacgtctgaccgatggccgcgtgaac
gtgctggtagcgaccgacgttgcagcgcgcggtattgatattcctgatgtcagccacgtg
tttaacttcgatctgccgcgcactgcggatacctatctgcaccgcattggccgtaccggt
cgtgccgggcgtaaagggacagctatttcgctggtcgaagcgcatgaccatctgctgctg
cagaaaattggtcgctacgttgaagagccgctgaaggcccgcgtgatcgacgaactgcgt
ccgagcacccgtgcgccgagcgaaaaaatgacgggcaaaccgtccaagaaagtgctcgct
aaacgtgccgagaaaaaggcgaaagagaaagagaaaccgcgcgtgaagcaacgccaccgt
gataccaaaaacgtgggcaagcgtcgtaagcctagcggcagcgcgccggtgacacagaaa
gaagagtaa
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