Leclercia sp. W6: DVA43_04860
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Entry
DVA43_04860 CDS
T08905
Name
(GenBank) cyclic di-GMP phosphodiesterase
KO
K14051
c-di-GMP phosphodiesterase Gmr [EC:
3.1.4.52
]
Organism
ley
Leclercia sp. W6
Pathway
ley02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DVA43_04860
Enzymes [BR:
ley01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
DVA43_04860
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS
PAS_4
GGDEF_2
Motif
Other DBs
NCBI-ProteinID:
AXF58919
UniProt:
A0AAD0LM17
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All DBs
Position
complement(975982..977973)
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AA seq
663 aa
AA seq
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MIDDLEQNLLFRYMGTHSPWWRLTADSNALHLAASESADTTQVVALNDEQANSIRQMTVI
TSSITMTLSLYGTEVPVHLVGRKINKKEWTGTASAWNDTPSVARDLAQGLSFAEQVVSEA
NSVIVILDRHGNIQRFNRLSEEYTGMKEHEVIGQNVFKLFMSRSEAAASRRNISGFFRDG
SSYEVERWIKTRKGQRLFLFRNKFVHSGSGKNEIFLICSGTDITEERRAQERLRVLANTD
TITGLPNRNAILDLISEAIETRGDGQVGVVYLDLDNFKKVNDAYGHMFGDQLLQAVALAI
LSCLEDGQVLARLGGDEFIVLATGTSQGALEAMASRILTRLRQPFRIGLIEVYTGCSLGI
SLAPQHGTDRESVIRNADTAMYTAKENGRGKFCVFSPEMNQRVFEYLWLDTNLRKALDND
QLVIHYQPKITWRGEVRTLEALVRWQSPERGLIPPLEFISYAEESGLIVPLGRWVMLDVV
RQVAKWRNKGINLRVAVNVSARQLADQTIFSDLKQALKDLNFEYCPIDVELTKSCLIENE
ELALSVIQQFSQLGAQIHLDDFGTGYSSLSQLARFPIDAIKLDQAFVRDIHKQSVSQSLV
RAIVAVAQALNLQVIAEGVESAKEDAFLTKNGVNERQGFLFAKPMPAVAFERWFKRYQSR
NAR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgatctggagcaaaatttgctgtttcgttacatgggcacccacagtccctgg
tggcggctgacggcggacagtaacgcgctccatcttgcggccagcgaaagcgccgatacc
acacaggttgtggcgctgaatgacgagcaggccaacagcattcgccagatgacggttatt
acctccagcattaccatgacgctctccctgtacggaaccgaggtgccagtgcacctggtg
ggacgtaagatcaataaaaaagagtggaccggtaccgcctccgcctggaacgacacccct
tctgtcgcccgcgacctggcgcaggggttatcctttgccgagcaggtggtttcagaggcc
aactcggtcatcgttattctcgaccggcacggcaatattcaacgcttcaaccgcctgagc
gaagaatataccgggatgaaagaacatgaagttattggtcagaacgtctttaaactgttt
atgagccgcagcgaggcagcggcttcccggcgtaatatcagcggtttttttcgggacggc
agctcctatgaagtggaacgctggattaaaacccgtaaagggcagcgtttgtttttattc
cggaataaattcgtgcacagcggcagcggaaaaaatgaaatattccttatctgttccggt
acggatatcactgaagaacgccgtgcccaggaacgtcttcgtgtacttgccaataccgat
accattactggcctgccaaaccgcaacgctatcctcgatctgatcagcgaagcgatagaa
acccgtggcgatggtcaggtgggcgtggtctatcttgacctcgataatttcaaaaaagtg
aatgatgcctacgggcatatgtttggcgatcagctgctgcaggcggtggcgctggctatc
ctcagttgtctggaggacgggcaggttcttgcgcgtctgggtggcgacgagtttatcgtg
ctggcaaccggtacgtcacagggtgcgctagaagctatggcttcgcggatccttacccgc
ctgcgtcagcctttccggattggtttaattgaagtctacaccggctgttcgctggggatc
tccctcgcaccccagcacggcaccgatcgggaaagcgtgatacgcaacgccgataccgcc
atgtataccgcgaaagagaacggccgcggcaagttctgcgttttctccccggaaatgaat
cagcgcgtatttgaatatctgtggctggacaccaacctacgcaaggcgctggacaatgac
cagctggtcatccactaccagcccaaaattacctggcgtggcgaggtgagaactctcgaa
gcgttggtgcgctggcagtctccggagcgcggactgatcccgccgctggagtttatctcc
tacgccgaagagtccggactgattgttccgctcgggcgttgggtaatgctggatgtagta
cgccaggtggccaaatggcgcaataaaggcatcaatttacgcgtggcggtcaacgtttcg
gcccgccagctggcagaccagacgattttcagcgatctgaaacaggcgctgaaggatctc
aattttgaatactgccctattgatgtcgagctgaccaaaagctgtctgattgaaaacgaa
gagctggcgctgtcggtgatccagcagttcagccagctgggggcgcagatccaccttgat
gatttcggaaccggttattcgtcgctgtcgcaactggcacgttttcccatcgatgccatt
aagctcgaccaggcgtttgtccgggatatccacaagcagtcggtgtcgcaatcgctggtg
cgcgcaatcgttgctgtcgctcaggcgctgaatttgcaggtgattgccgaaggggtcgag
agtgcgaaagaagacgcctttctgacgaagaacggcgtcaatgaacgacagggatttctg
tttgctaaacccatgcccgctgtcgctttcgagcgatggtttaaacgttatcagtcacgg
aatgcgcgctag
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