Leclercia sp. W6: DVA43_05140
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Entry
DVA43_05140 CDS
T08905
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ley03009
]
DVA43_05140
Enzymes [BR:
ley01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DVA43_05140
Ribosome biogenesis [BR:
ley03009
]
Prokaryotic type
rRNA helicases
DVA43_05140
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
PMI_typeI_cat
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXF58966
UniProt:
A0AAD0LKS8
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All DBs
Position
1041019..1042392
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AA seq
457 aa
AA seq
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MTAFSTLNVLPAAQLDNLNELGYLTMTPVQAAALPAILEGRDVRVQAKTGSGKTAAFGLG
LLQQIDATLFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQ
HAPHIIVATPGRLLDHLQKGTVSLDALQTLVLDEADRMLDMGFSDAIDEVIRFAPPTRQT
LLFSATWPEAIAAISGRVQQNPLAIEIDSVDALPAIEQQFFDTTQRGKIPLLQKLLSIHQ
PASCVVFCNTKKDCQAVCDALAEAGQSALALHGDLEQRDRDQTLVRFANGSARVLVATDV
AARGLDIKSLELVVNFELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILAEML
QIKLNWVDAPANVTITPLAAEMATLCIDGGKKAKMRPGDVLGALTGDIGLDGADIGKIAV
HPAHVYVAVRQSVAQKAWKQLQNGKIKGKSCRVRLLK
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
gtgactgctttttcaacgctgaacgtactgcctgccgcccaactcgataacctgaacgag
ttgggttatctgaccatgacccctgtacaagctgccgcgctgccagcgatcctggaagga
cgcgacgtccgtgtgcaggccaaaaccggcagtggtaaaacggctgccttcggtcttggg
ctgttacagcagattgatgccacgctgtttcagacgcagtcgctggtactttgcccgacg
cgcgagctggcggatcaggtcgcaggagagttacgtcgcctggcgcgttttctgccgaac
accaaaattttgaccctctgcggcgggcagccgttcggcgcccagcgtgactctttgcag
catgccccgcatatcatcgtcgctacgccgggccgtctgctcgaccatctgcagaaaggc
accgtctcgcttgatgcactgcaaaccctggtgctggatgaagccgaccggatgctcgac
atgggctttagcgatgccattgatgaagtgattcgctttgcgccgccaacgcgccagacg
ttgcttttctccgccacatggccggaggcgatcgccgccatcagcggacgtgtgcagcaa
aatccgctcgccattgaaattgattctgtggacgcgctgcccgccattgaacagcagttc
ttcgataccacccagcggggcaaaatcccgctgctgcaaaaactgctcagcattcatcaa
cctgcttcctgcgtggtgttctgtaacaccaaaaaggattgccaggcggtatgcgatgcg
ctggccgaggccggacagagcgccctggcgctgcatggcgatctggagcagcgcgatcgt
gaccagaccctggtacgttttgccaatggtagcgcccgtgtgctggtcgccaccgacgtc
gcggcccgcggcctggacattaaatccctggagctggtggtgaacttcgagctggcctgg
gatccggaggtgcatgttcaccgtattggccgtaccgcgcgagccggtaacagtggcctg
gcgatcagcttctgcgcgccagaggaggcacagcgtgccaacatcctggctgagatgctg
caaatcaaactgaactgggttgatgccccggcaaacgtcaccattacgccgctggcggca
gagatggcaacgctctgtatcgacggcggtaaaaaagccaaaatgcgtcccggcgatgta
ctgggggcgctgaccggtgatatcggcctggacggtgcagacattggtaaaatcgcggtg
catccggcgcatgtgtatgtggcggtgcgtcagtctgtcgcgcagaaagcgtggaaacag
ctgcaaaacggcaagatcaaaggcaaaagctgccgcgttcgtctgctgaaataa
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