Leclercia sp. W6: DVA43_10115
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Entry
DVA43_10115 CDS
T08905
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ley03009
]
DVA43_10115
Ribosome biogenesis [BR:
ley03009
]
Prokaryotic type
ribosomal protein modification factors
DVA43_10115
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GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
AXF59877
UniProt:
A0AAD0LLH0
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Position
2047700..2049460
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AA seq
586 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLTDLGFNIEEASWLNPVPHVWSVHIRDKECALCFTNG
KGATKKAALASALGEYFERLSTNYFFADFWLGETVANGPFVHYPNEKWFPLTEDDELPEG
ILDDRLRAFYDLENQLTASMLVDLQSGNEERGICALPFTRQSDEQTVYIPMNIVGNLYVS
NGMSAGNTRNEARVQGLSEVFERHIKNRIIAESISLPEIPAEVLARYPGVVESIAKLEAE
GFPIFAYDGSLGGKYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTPPTFDDEEVAEHANLETHFIDSSGSISWDLFKQDADYPFVDWSFSGTTEEEFATLM
AIFTAEGQEVYIADYEHLGVYACRILVPGMSDIYPVEDLWLANNSMGSHLRETLLALPES
AWEKEDYLNLITQLDDEGHDDFTRVRELLGLATGKDNGWYTLRIGELKAMLALAGGDLEQ
ALIWTEWTIEFNASVFSAERANYYRCLQTLLLLAQEEDRQPLQYLNAFTRMYGAEAVENA
SAALSGEAPFYGLQAVDSDLKAFPSHQSLLKAYEKLQKAKSAYWAK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaacgtttatccccggcaaagacgccgccctggaagattccatcgctcgcttc
cagcaaaaactgaccgacctgggctttaacatcgaagaggcctcctggctcaacccggtt
ccccacgtctggtctgtgcatattcgcgataaagagtgcgcgctgtgctttaccaatggc
aaaggtgcgaccaaaaaagcggcgctggcctctgcgctgggtgagtattttgaacgtctg
tccactaactatttctttgccgatttctggctgggcgagaccgtggcgaatggcccgttt
gttcattatccgaatgaaaaatggttcccgctgaccgaagatgacgaactgccggaaggg
atcctcgacgatcgtctgcgtgcgttttacgatctggagaatcaactgaccgccagcatg
ctggttgatttgcagtcaggtaatgaagaacgcggtatctgcgccctgccgtttacccgc
cagtctgacgagcagaccgtctatattccgatgaacatcgtcggcaacctgtatgtctcc
aacggcatgtcagccggtaacacccgcaacgaagcgcgtgttcagggtctgtccgaagtc
tttgagcgccatattaaaaaccgcattatcgcggaatctatcagcctgccggagatcccg
gctgaggtgctggcccgctacccgggcgtggtggagtccattgccaaactggaagcagaa
ggcttcccaatcttcgcctatgacggctcgctgggcgggaagtacccggttatctgcgtg
gtgctcttcaacccggcgaacggcacctgcttcgcctccttcggggcgcacccggacttc
ggcgtagcgctggaacgtaccgttaccgagctgctgcagggccgtagcctgaaagatctc
gatgtcttcactccgccgacgtttgatgacgaagaagtggcggaacatgccaacctggag
acgcacttcatcgactccagcggctctatctcctgggatctgttcaagcaggacgcggat
tatccgtttgttgactggagcttctccggcaccacggaagaagagttcgccaccctgatg
gctatcttcactgccgaagggcaggaagtgtacatcgccgattatgaacacctgggcgtc
tacgcctgccgtattctggtgccgggtatgtccgacatctatccggtggaagatctgtgg
ctggccaataacagcatgggtagccacctgcgcgaaaccctgctggcgctgccggagagc
gcatgggagaaagaggactacctgaacctcatcacccaactggatgacgaaggccacgat
gactttacccgcgtacgcgagctgctggggctggcgacgggtaaagacaatggctggtac
accctgcgtattggcgagctgaaggcgatgctggcgctggcaggcggcgatctggaacag
gcgctgatctggaccgaatggaccatcgagttcaacgcctcggtattcagcgcggagcgt
gcgaactactaccgttgcctgcagacgctgctgttgctggcgcaggaagaagatcgtcag
ccgctgcagtatctcaacgccttcacccgcatgtacggtgccgaagcggtagagaacgcc
agcgcggccctgagcggcgaagcgccgttctatggcctacaggccgtggacagcgatctg
aaagccttcccttctcaccagtccttgctgaaggcctatgagaaactgcagaaagccaaa
agcgcgtactgggctaaataa
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