Leclercia sp. W6: DVA43_13575
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Entry
DVA43_13575 CDS
T08905
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ley
Leclercia sp. W6
Pathway
ley03030
DNA replication
ley03430
Mismatch repair
ley03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DVA43_13575
03430 Mismatch repair
DVA43_13575
03440 Homologous recombination
DVA43_13575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ley03032
]
DVA43_13575
03400 DNA repair and recombination proteins [BR:
ley03400
]
DVA43_13575
Enzymes [BR:
ley01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DVA43_13575
DNA replication proteins [BR:
ley03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DVA43_13575
DNA repair and recombination proteins [BR:
ley03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DVA43_13575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AXF60497
UniProt:
A0AAD0LTP5
LinkDB
All DBs
Position
complement(2761769..2765251)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTAHGA
GMKPVIGADFHVQSELLADEMTQITVLALNNTGYQNLTLLISRAYQRGYGPQGPWIDRAW
LAELNEGLLLISGGRMGDVGRCLLRGNTALVEQCVDFYKEYFPDRFYLELIRTGRPDEES
YLHAAVALAEEQGLPVVATNDVRFINADDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAEKRPEYDERLDVELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDESGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALKMINPRRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGQYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHSKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQTVLDGERETLGLY
LTGHPINQYIKEIERYVGGYRLKDMHPTERGKITTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGASWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgattgatggg
ctggcgaagaccgggccgctggtgaaaaaggcggcctcgcttggcatgcctgcgctggcg
atcaccgacttcactaacctgtgcggtctggtgaagttctacggaacggcgcacggtgcc
gggatgaagccggtaattggtgctgattttcacgtacagagcgagcttctcgccgatgaa
atgacgcaaattaccgtcctggcgctgaacaataccggctatcaaaacctgacgctgctc
atctcccgtgcctatcagcgcggctacggcccgcagggcccgtggatcgatcgcgcgtgg
ctggcggagctgaatgaggggctgctgctgatctccggcgggcgtatgggcgacgtaggc
cgatgcctgctgcgcggcaacaccgccctggtggagcagtgcgtcgatttttataaagag
tatttcccggatcgcttctacctggagctgatccgcaccggtcgtcctgatgaagagagc
tatctgcacgccgcggtcgccctggcggaagagcagggcctgccggtggttgccaccaac
gatgtgcgcttcatcaacgctgatgattttgacgcccatgaaattcgcgttgccattcac
gatggttttaccctcgacgatcccaaacgcccgcgtaactattcgccgcagcagtacatg
cgcagcgaagaggagatgtgcgagctgttttccgatatcccggaagcgctggagaatagc
gtagaaatcgccaagcgctgtaacgtcaccgtccgtctgggtgaatacttcctgccgcag
ttcccgaccggcgacatgaccaccgaagacttcctggtcatgaaatcgaaagaaggtctg
gaagagcgacttgagtttctgttcccggatccggccgttcgcgccgagaagcgcccggag
tatgacgagcgtctggacgttgagctccaggtgattaaccagatggggttccccggctac
ttcctgatcgttatggagtttatccagtggtcgaaagacaacggcgtaccggtagggccg
ggccgtggttcgggtgccggatcgctggtggcctatgcgctgaaaattaccgatctcgat
ccgctggaatttgatctgctgttcgaacgcttcctcaacccggaacgtgtctcgatgcct
gactttgacgtcgatttctgcatggagaaacgcgaccaggtcattgaacacgtggcagac
atgtacggtcgtgacgcggtatcgcagatcattaccttcggtaccatggcggcaaaagca
gttatccgcgacgtgggccgcgtactggggcatccgtacggctttgttgaccgcatctcg
aagctggtaccgcctgacccgggcatgaccctggcgaaagcgttcgaagcggagccgcag
ctgccggaaatctatgaggcggatgaagaggttaaagcgctgatcgacatggcgcgtaag
ctggaaggggtcacccgaaacgccggtaaacacgccggtggggtggtcattgccccgacc
aaaattaccgactttgcgccgctctactgcgatgaatcgggcctgcatccggtcacccag
tttgacaagaatgacgtggaatacgccgggctggtgaagtttgacttcctcggcttgcgt
acgcttaccatcatcgactgggcgttgaagatgatcaacccgcgccgggccaagcagggc
ctggagccgattgatatcgccgcgatcccgctcgatgacaagaaaagtttcgacatgctg
caacgctcggagaccacggcggtcttccagcttgaatcccgcggcatgaaagatctgatc
aaacgtctgcagcctgactgcttcgaggacatgatcgcgctggtggcgctgttccgtccg
gggccgctgcagtccgggatggtagataactttatcgaccgtaagcatggccgcgaggag
ctctcctatccggatgttcagtggcagcatgaaagcctgaagccggtgctggagccaacc
tacggcatcatcctgtatcaggaacaggtcatgcagatcgcccaggtgctctccggctac
accctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgctctatatttgaagatggggcgaagaaaaacggcatcgacggcgaactg
gcgatgaagatcttcgatctggtagagaaatttgccggatacggatttaacaaatcgcac
tctgcggcctacgcgctggtctcctatcagacgctgtggctgaaggcgcactacccggcc
gagtttatggccgcggtaatgaccgccgatatggacaacaccgagaaggtagtcgggctg
gtggatgagtgctggcgcatggggctgaaaatcctgccgcctgacatcaactccggtcag
taccacttccacgtcaatgacgacggggagattgtctacggcatcggcgcgatcaaagga
gtgggtgaaggcccgatcgaagcgatcatcgaagctcgtaaccagggcggctacttccgc
gagctgtttgacctctgtgcgcgtaccgatattaaaaagctcaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgatcgtctcgggccgcatcgcgcggcgctgatgaac
tcgctgggggacgccctgaaggccgccgaccagcactcaaaagccgaggccattggccag
gcggatatgttcggcgtgctggcagaagagccggagcagattgaacaatcctatgccagc
tgtcagccgtggccggaacagaccgtgctggatggtgagcgcgagacgttaggcctgtat
ctgaccgggcatccgatcaatcagtatattaaagaaattgagcgctatgtcggaggctac
cggctgaaagacatgcatccgacagaacgtggtaagattactacggctgcggggctcgtc
attgctgcgagggttatggtcaccaaacgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcggctggaggtgatgttattcaccgacgcgctggataaataccagcag
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
gggggacttaaaatgaccgcccgcgaagtgatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgctcggggaccattccagtacatctctactatcag
agggcggatgcgcgtgcacggttgcgctttggtgcgtcgtggcgtgtctctccgagcgat
cgtttactgaacgatctacgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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