Leclercia sp. W6: DVA43_16535
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Entry
DVA43_16535 CDS
T08905
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ley
Leclercia sp. W6
Pathway
ley00730
Thiamine metabolism
ley01100
Metabolic pathways
ley01240
Biosynthesis of cofactors
Module
ley_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DVA43_16535
Enzymes [BR:
ley01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DVA43_16535
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AXF61032
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All DBs
Position
3397112..3399007
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AA seq
631 aa
AA seq
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MSATKLTRREQRAQAQHFIDTLEGTAFPNSKRIYLTGSREDIRVPMREIQLSPTLVGGSK
ENPQFEENEAVPVYDTSGPYGDPAITINVQQGLAKLRQPWIDARNDCEALTEQSSAYTRE
RLADDGLDELRFSGLLTPKRARAGKCVTQLHYARQGIVTPEMEFIAIRENMGRERIRTDV
LRHQHPGEGFGARLPENITPEFVRDEVAAGRAIIPANINHPESEPMIIGRNFLVKVNANI
GNSAVTSSIEEEVEKLVWSTRWGADTVMDLSTGRYIHETREWILRNSPVPIGTVPIYQAL
EKVNGIAEDLTWEAFRDTLLEQAEQGVDYFTIHAGVLLRYVPMTAKRLTGIVSRGGSIMA
KWCLSHHRENFLYEHFREICEICAAYDVSLSLGDGLRPGSIRDANDEAQFAELHTLGELT
KIAWEYDVQVMIEGPGHVPMQMIRRNMTEELEHCHEAPFYTLGPLTTDIAPGYDHFTSGI
GAAMIGWFGCAMLCYVTPKEHLGLPNKEDVKQGLITYKIAAHAADLAKGHPGAQIRDNAM
SKARFEFRWEDQFNLALDPFTARAYHDETLPQESGKVAHFCSMCGPKFCSMKISQEVRDY
AAAQTIEVGMADMSETFRARGGEIYLKKEEA
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccacaaaattgacccgccgcgaacagcgcgcacaagcccaacactttatcgac
actctggaaggcaccgctttccctaactcaaaacgcatctatctgaccggctcccgggag
gacattcgcgtgcccatgcgcgagatccaactcagcccgacgctcgtcggcggcagcaaa
gagaatccccagtttgaagagaacgaagcggtgccggtctacgacacgtccggcccgtac
ggcgatccggcgataaccatcaacgtgcagcaggggctggcgaaactgcgccaaccgtgg
attgacgcacgtaacgactgcgaagcgctaaccgaacaaagctcagcttacacccgggag
cgcctggccgatgatggtctggacgagctgcgcttctccggccttcttacgccgaaacgt
gccagagcgggcaaatgcgtcacccagctgcactacgcccgtcaggggatcgtaaccccg
gagatggagtttatcgctattcgcgaaaacatgggccgcgagcgcatccgtaccgacgtg
ctgcgccaccagcatccgggcgaagggtttggtgcccgcctgccggaaaacatcaccccg
gagtttgtccgtgacgaagtcgccgccggacgcgccattatcccggccaacattaaccac
ccggagtcggaaccgatgattatcggtcgtaacttcctggtgaaagtgaacgccaacatc
ggtaactcagcggtcacctcgtctatcgaagaggaggtggagaaactggtctggtcaacc
cgctggggcgcggacacggtgatggacctctctaccgggcgctatattcacgaaacccgc
gaatggatcctgcgtaacagcccggtgcccattggtacggtgcccatctaccaggcgctg
gagaaggtgaacggcatcgccgaagatctcacctgggaggccttccgggataccctgctg
gagcaggccgagcaaggcgtcgactacttcaccatccacgccggcgtgctgctgcgctac
gtgccgatgacggcgaaacgcctgaccggcatcgtctcccgcggcggttcaatcatggcg
aaatggtgcctctcccaccatcgggaaaacttcctctatgaacacttccgcgaaatctgc
gagatctgcgccgcgtacgacgtgtcgctgtcgctgggcgatggcctgcgtccgggctcc
attcgcgatgccaacgacgaggcgcagtttgccgagctgcacaccctgggcgagctgacc
aaaatcgcctgggagtatgacgtgcaggtgatgatcgaaggcccgggccacgtgccgatg
cagatgatccgccgcaacatgaccgaagagctggagcactgccacgaagcgccgttctat
accctggggccgttgaccaccgatatcgcaccgggttatgaccacttcacctccgggatt
ggcgcggcgatgatcggctggttcggctgcgccatgctctgctacgtcacgccgaaagag
cacctcggcctgccgaacaaagaggatgtgaagcaggggctgatcacctacaaaattgcc
gcccacgctgccgacctggcgaagggccatccgggggcgcagatccgcgataacgccatg
tcaaaagcgcgcttcgagttccgctgggaagatcagttcaacctcgccctcgacccgttc
accgcccgcgcctaccacgacgaaaccctgccgcaggagtccggcaaagtggcgcacttc
tgttccatgtgcgggccaaaattctgctcgatgaaaatcagccaggaggtgcgtgattac
gccgccgcgcagaccatcgaagtgggcatggccgatatgtcggaaaccttccgcgcccgg
ggcggcgaaatctacctcaaaaaagaggaggcgtaa
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