Leclercia sp. W6: DVA43_17855
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Entry
DVA43_17855 CDS
T08905
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ley03032
]
DVA43_17855 (gyrB)
03400 DNA repair and recombination proteins [BR:
ley03400
]
DVA43_17855 (gyrB)
Enzymes [BR:
ley01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DVA43_17855 (gyrB)
DNA replication proteins [BR:
ley03032
]
Prokaryotic type
DNA Topoisomerases
DVA43_17855 (gyrB)
DNA repair and recombination proteins [BR:
ley03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DVA43_17855 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
GyrB_hook
HATPase_c
HATPase_c_3
DUF6865
Motif
Other DBs
NCBI-ProteinID:
AXF61273
LinkDB
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Position
complement(3647460..3649871)
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AA seq
803 aa
AA seq
DB search
MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKDII
VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSQKLELVINREGKIHRQVYTHGVPQAPLAVTGETEKTGTTVRFWPSLETFSNVT
EFEYDILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI
FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNAYMDKE
GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLSDY
LQENPSDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG
KQEQYIKDDEAMDQYQIAIALDGATLHANSSAPALAGEPLERLVSEYNATQKMIGRMERR
YPKALLKALVYQPTLNEADLDNEQAVTRWVNTLVSELNENEQHGSQWKFDIQQNAAQQFE
PVIRVRTHGVDTDYPLEHEFVTGAEYRRICTLGEKLRGLIEDDAFIERGERRQPVASFEQ
ALEWLVKESRRGLSIQRYKGLGEMNPDQLWETTMDPESRRMLRVTVKDAIAADQLFTTLM
GDAVEPRRAFIEENALKAANIDI
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcttatgactcctccagtatcaaagtcctgaaagggctggatgcggtgcgt
aagcgcccgggtatgtatatcggcgatacggatgacggcaccggtctgcaccacatggta
ttcgaggtggtagataacgctatcgacgaagcgctcgcgggtcactgtaaagacattatt
gtcaccatccacgccgataactctgtttccgtacaggatgacggacgcggcatcccaacc
ggcatccacccggaagagggcgtctctgcggcggaagtgatcatgaccgttctgcacgcg
ggcggtaagttcgatgataactcctataaagtgtccggtggtctgcacggcgtgggcgtc
tctgtagttaacgccctgtcgcagaagctggagctggtgatcaaccgcgaaggtaaaatt
caccgtcaggtctatacccacggcgtgccgcaggcaccgctggcggtaacgggcgagacg
gagaaaaccggtaccacggtccgtttctggccgagcctcgaaactttctccaacgtgacc
gagttcgaatatgacatcctggcgaagcgtctgcgcgagctgtcattcctgaactccggc
gtctcgattcgcctgcgcgacaagcgcgacggcaaagaagaccacttccattacgaaggc
ggtatcaaggcgttcgttgagtatctgaacaagaacaaaacgccaattcacccgaatatc
ttctatttctccaccgaaaaagatggtatcggcgtggaagtagcgctgcagtggaacgac
ggtttccaggaaaacatctactgcttcaccaataacattccgcagcgcgacggtggtacg
cacctggtcggcttccgtacggcgatgacccgtaccctgaacgcctacatggacaaagaa
ggctacagcaaaaaagcgaaagtcagcgccaccggtgacgatgcccgtgaaggcctgatc
gccgttgtctccgtaaaagtgccggatccgaagttctcctcccagaccaaagacaagctg
gtctcctctgaggtgaaatcggcggttgaacagcagatgaacgagctgctgagcgactac
ctgcaggaaaacccgtccgacgctaaaatcgtcgtcggtaaaattattgatgcggcgcgt
gcccgtgaagcggcgcgtaaagcccgtgaaatgacccgtcgtaaaggcgcgctggattta
gcaggcctgccaggcaaactggcggactgccaggaacgcgacccggcgctatccgaactg
tacctcgtggaaggggactccgcgggcggttctgcgaagcagggccgtaaccgtaagaac
caggcgatcctgccgctgaagggtaaaatcctcaacgttgagaaggcgcgcttcgacaag
atgctctcctctcaggaagtggcaaccctgatcaccgcgctgggctgcggcattggccgc
gacgagtacaacccggacaagctgcgctatcacagcatcatcatcatgaccgatgcggac
gtcgacggctcgcacattcgtaccctgctgctgaccttcttctaccgtcagatgccggag
atcgttgagcgtggccacgtctacattgcccagccgccgctctacaaggtgaaaaaaggc
aagcaggagcagtacatcaaagatgacgaggcgatggatcagtaccagatcgctatcgct
cttgatggcgccaccctgcacgccaactcaagcgccccggcgctggcgggcgagccgctg
gagcgtctggtctccgagtacaacgccacccagaagatgattggccgcatggagcgccgt
tatccaaaagcgctgctgaaggcgctggtttaccagccgactctgaacgaagccgatctc
gataacgagcaggcggtgacccgctgggtaaataccctggtcagcgagttgaacgagaac
gagcagcacggtagccagtggaagttcgatattcagcagaacgccgctcagcagttcgag
ccggtgatccgtgtgcgtacccacggcgtggataccgactatccgctggagcacgagttc
gtgaccggcgcggaataccgtcgtatctgtaccctcggcgagaagctgcgtggcctgatc
gaagacgacgccttcatcgagcgtggcgaacgccgtcagccggttgccagcttcgagcag
gcgctggagtggctggtgaaagagtcccgtcgtggcctctccattcagcgctataaaggt
ctgggcgaaatgaacccggatcagctgtgggaaacgaccatggatccggaaagccgccgc
atgctgcgcgttaccgttaaggacgcgattgctgccgaccagctgttcactaccctgatg
ggcgatgcggttgaaccccgtcgcgccttcatcgaagagaacgccttgaaagcggcgaat
atcgacatctaa
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