Leclercia sp. W6: DVA43_17990
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Entry
DVA43_17990 CDS
T08905
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
ley
Leclercia sp. W6
Pathway
ley00040
Pentose and glucuronate interconversions
ley01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
DVA43_17990
Enzymes [BR:
ley01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
DVA43_17990
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta_helix
Pel9A-like_beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
AXF61298
UniProt:
A0AAD0PPU6
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All DBs
Position
3677089..3679179
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AA seq
696 aa
AA seq
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MKSKIPLALMMCSAFSAMATEQPHVWKAIAFGQSTDLNFSSNVLPEKIGVNDVTIDGKKL
SPQESADLAKAITLESRGGKIANSHDGLTFFYTELPTAENFVLQATVRVDQFGPENGAKP
AAQEGAGLLVRDVLGNPRQQPLKTGYEEFPAASNQVMNAIMTQDKKDHQRVKMQAITREG
ISHPWGDAGAAIKKQSYKEEVDLSQTPEFRLKLQRTDDGFITAWAPLDSDTWVSKRVPRA
DLISVQNKDHYYVGFFASRNAKITVTNASLTTTSAHTVPSEPWQAEPLPVVVQLASGTVS
ASPDYLLQARANEDGVFSVRQNEVVIGNEKAVKAGEMYTLPARLEQTSTFTVTFTPAHGT
PVNQQLTVERIADRDTTHLYAAPDGKADAQGTADAPLDLATAIALLAPGGKLVLKSGDYP
QSEIPVAASGSSDKLKTLQADGKVVIHGLLLDASYWHINGIDVTGKSLRVQGSHNLIERV
TAYRNDDTGIQISSPEKIGRPLWASYNRVVDSESYANEDPGKINADGFAVKMRVGEGNRL
ERCYSHDNIDDGFDLFNKIEDGANGVVVIENSVASNNTSNGFKLGGEGQPVAHQIRNSKA
TGNHLDGFTDNFNPGRLVVENNIAVDNQRFNYIFRPSPYGDVTTQGTFTGNVSIRNKPGE
YDDAVTGNIDNTNYFIKKGKSVNSEGKELDKTQVKM
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctaaaatacctctggccctgatgatgtgtagcgccttttccgctatggcaaca
gaacaacctcatgtctggaaagccatcgcctttgggcaatcaacggatctgaatttttcc
tccaacgtgctgcccgaaaaaatcggcgtcaatgatgtgaccatcgacgggaaaaagctc
tcaccccaggagagcgctgacctggcgaaagccatcaccctggaaagccggggcggcaaa
atcgccaactcccacgacggcttaacgtttttctataccgagctgccgacggcagaaaat
ttcgttttgcaggccactgtccgggtcgaccagtttgggccggagaatggcgcgaaacct
gccgcgcaggagggcgccggactgctggtgcgcgatgtcctcggcaacccgcgccagcaa
ccgctaaaaacgggttatgaagagtttccggcggcatcgaatcaggtgatgaacgccatc
atgacccaggataaaaaagaccatcagcgagtaaaaatgcaggctatcacccgggagggg
atcagccatccctggggtgatgccggagccgccattaagaagcagagttataaggaagag
gtggatctgagccagacgccggaatttcgcctgaaactccagcgcaccgacgacggcttt
attaccgcctgggccccgctggacagcgacacctgggtgagcaagcgcgtgccgcgcgct
gacctgatttcggtacagaacaaggatcactattacgtcggcttttttgcctcccgcaat
gccaaaataacggtcactaacgcctcgctcaccaccaccagcgcccataccgtgccttcg
gagccctggcaggcagagccactgccggtcgtggtgcagctggcgtccggtacggtcagc
gcttcgccagattacctgctgcaggcgcgcgctaatgaggacggggtatttagcgtaaga
caaaacgaagtggtgatcggtaatgagaaagcggtgaaagcaggcgagatgtacaccctg
ccagcccgcctggagcagaccagcaccttcacggtgacctttacgcctgctcatggcacg
ccagtgaatcagcagctcaccgtcgaacgcattgcggacagagatacgacgcacctgtat
gccgctccggacggaaaagcggatgcacaaggcaccgccgatgcgccactggatctcgcc
accgccatcgccctgctggcgcccggtggcaaactggtgctgaaaagcggcgattacccg
cagagtgagatccccgtcgctgccagcggcagcagcgataaactcaaaaccctgcaggca
gacggtaaagtggtgatccacggcctgctgcttgatgccagctactggcatatcaacggt
atcgacgtgaccggcaaaagtttgcgcgtccagggtagccataacctgatcgagcgcgtc
acggcctaccgcaacgatgataccgggatccagatctcctccccggaaaaaattggccgg
ccattatgggcaagctataaccgggttgtggattctgaatcttacgccaatgaagatccc
ggcaagattaatgccgatggcttcgcggtgaaaatgcgggtgggggaaggtaaccggctg
gagcgttgctattcccacgacaatatcgacgacggttttgacctgttcaacaagattgaa
gatggcgcaaacggcgtggtcgtgatcgagaactcggttgccagcaacaataccagtaac
ggctttaagctcggcggagaagggcagcctgttgcgcatcagatccgcaatagcaaagcc
acgggcaatcacctggacggcttcaccgataactttaaccccggcaggctggtggtggag
aacaatatcgcggtggataaccagcgctttaactatatcttccgtccaagcccgtacggc
gatgtgaccactcagggaacctttaccggcaacgtatcgatccgtaataagccaggcgag
tacgacgatgcggtaacaggaaacattgataacacgaactactttatcaagaagggtaaa
agcgtgaacagtgaagggaaggaactggataaaacgcaggtaaaaatgtag
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