KEGG   Leclercia sp. W6: DVA43_18775
Entry
DVA43_18775       CDS       T08905                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
ley  Leclercia sp. W6
Pathway
ley03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ley00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DVA43_18775
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ley03019]
    DVA43_18775
Enzymes [BR:ley01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DVA43_18775
Messenger RNA biogenesis [BR:ley03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DVA43_18775
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CCDC138_C ERCC3_RAD25_C AAA_22
Other DBs
NCBI-ProteinID: AXF61437
UniProt: A0AAD0LP67
LinkDB
Position
complement(3842970..3844235)
AA seq 421 aa
MSKTHLTEQKFSDFALHPKVIEALENKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIADRKVNQPRALIMAPTRELAVQIHADAEPLAQATGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPAANQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
EEKMRLLQSLIEEEWPDRAIVFANTKHRCEDIWGHLAADGHRVGLLTGDVAQKKRLRILE
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGHSISLA
CEEYALNLPAIETYIGHSIPVSKYNPEALLSELPPPKRLTRARSGNGPRRNSAPRNRRRS
G
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaggtg
attgaagcccttgaaaataaagggtttcataactgcacgcccattcaggctctcgccctt
ccgctgacgctggcgggtcgcgacgttgcagggcaggcgcaaaccggtaccggcaaaacg
atggcgtttttaacgtcaacgtttcattatttactctctcatccggcaattgctgaccgt
aaagttaaccaaccgcgcgcgctgattatggcaccgacgcgagaactggcggtacagatc
cacgctgatgcagaaccactggcgcaagctaccggcctgaaactcggcctggcctacggc
ggtgacggttatgacaaacagctgaaagtgctggaaagcggcgtcgatattctgatcggc
accaccggccgtcttatcgattacgcgaaacagaaccacattaacctcggcgctatccag
gttgtggtgctggacgaagccgatcgcatgtacgatctcggctttattaaagatatccgc
tggctgttccgccgcatgcctgccgctaaccagcgtctgaatatgctgttctcggccacg
ctctcttatcgcgtccgtgaactggcgttcgaacagatgaacaacgccgaatatgtcgaa
gtggaaccggaacagaaaaccggccaccgtattaaagaagagctcttctacccttctaac
gaagagaaaatgcgtcttctgcagtcgctcattgaagaagaatggccggatcgcgcgatc
gttttcgccaacaccaaacaccgctgtgaagatatctggggccacctggctgcggatgga
caccgtgttggtctgttgaccggcgatgtcgcacagaaaaaacgtctgcgcattcttgaa
gagttcacccgtggcgatctggatattctggtggcaacggatgtcgccgcgcgcggtctg
cacatcccggcggttacgcacgtcttcaactatgacctgccggacgactgcgaagattac
gttcaccgtatcggacgtaccggtcgtgcgggtgccagcgggcactccatcagcctggcc
tgtgaagagtacgcgctgaacctgccagcaattgagacctatatcggccactcaattccg
gtcagcaaatacaacccggaagcgctgttgagcgaacttccaccgccgaaacgcctgacc
cgcgcgcgttctggcaatggtccgcgccgtaacagcgcaccgcgtaatcgtcgtcgttca
ggctaa

DBGET integrated database retrieval system