Leclercia sp. W6: DVA43_18930
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Entry
DVA43_18930 CDS
T08905
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
ley
Leclercia sp. W6
Pathway
ley03420
Nucleotide excision repair
ley03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DVA43_18930
03430 Mismatch repair
DVA43_18930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ley03400
]
DVA43_18930
Enzymes [BR:
ley01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DVA43_18930
DNA repair and recombination proteins [BR:
ley03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DVA43_18930
MMR (mismatch excision repair)
Other MMR factors
DVA43_18930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
AAA_30
UvrD_C_2
AAA_22
PhoH
DMP19
Motif
Other DBs
NCBI-ProteinID:
AXF61464
LinkDB
All DBs
Position
3872481..3874643
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQRDAVAATRTNMLVLAGAGSGKTRVLVHRIAWLQSVENCSPYSIMAV
TFTNKAAAEMRHRIAQLMGTSQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSFGNPIEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDS
SKVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTNNILSAANALIENN
NGRLGKKLWTEGIDGEPISLYCAFNELDEARFVVNRIKTWQDNGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQASRELLQERALAGRAASALQRFLELIEALAQETADMPLHVQ
TDRVIKDSGLRMMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFVGELPEECVEEVRLRASISRPVSHQRLG
TPVSESDSGFKLGQRVRHAKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagcctcaatgacaaacagcgtgacgcggttgccgcg
acgcgcaccaacatgctggttctggctggggcgggcagtggtaagacacgcgtgctggta
caccgtatcgcctggctgcagagcgtggagaactgttcgccatactccattatggcggtg
accttcaccaacaaagcggcggcggagatgcgccaccgtatcgcccagctgatgggcacc
agccagggcggcatgtgggtgggcaccttccacgggctggcgcaccgcctgctgcgtgcg
caccatctggacgctaacctgccgcaggattttcagatcctcgacagcgaagatcagctg
cgtctcctgaagcgcctgatcaaggccatgaacctcgacgagaagcagtggccgccgcgt
caggcgatgtggtacatcaacagccagaaagacgaagggctgcgtccgcaccatatccag
agctttggtaatccgattgagcagacctggcagaaagtctaccaggcctatcaggaagcc
tgcgatcgcgccgggctggtggattttgccgagctgctgttgcgcgctcatgagctgtgg
ctgaacaaaccgcatattctgcagcactatcgcgaacgctttaccaacatcctggtggac
gaattccaggatactaacaacattcagtacgcgtggatccgcctgctggcgggcgactcc
agcaaggtgatgatcgtgggtgacgacgatcagtcgatctacggctggcgcggcgcacag
gtcgagaacatccagcgcttcctgaaggatttccccggcgcagagaccattcgcctggaa
cagaactaccgctccaccaacaacattctgagcgcagccaatgccctgattgaaaataac
aacggtcgcctgggcaaaaagctctggaccgagggcatcgacggcgagcctatctccctc
tactgcgcctttaacgagctggatgaagcccgctttgtggtcaaccggatcaaaacctgg
caggacaacggcggggcgctggagcagtgcgccattctctatcgcagcaacgcccagtcg
cgtgtgctggaagaggcgctgctacaggccagcatgccctaccgcatctacggcggcatg
cgcttcttcgaacgtcaggagatcaaagacgcgctctcctatctgcgtctgatcgccaac
cgcaacgacgatgcggccttcgagcgcgtggtcaacacgccaacccgcggcatcggcgat
cgcaccctggatgtggtgcgtcagacctcccgggatcgccagctgacgctgtggcaggcg
agtcgcgagctgctgcaggagcgggcgcttgccggacgcgcagccagcgcgctgcagcgc
ttcctggagcttatcgaagctctggcgcaagaaaccgccgacatgccgttgcacgttcag
accgaccgggtgatcaaagactccggcctgcgcatgatgtatgagcaggagaaaggcgag
aagggccagacccgtattgagaacttagaggagctggtgaccgccacgcgtcagttcagc
tacaacgaagaagatgaagacctgatgccgctgcaggcgttcctgtcccatgccgcgctg
gaggcgggcgaagggcaggccgacacctggcaggacgcggtgcagctgatgaccctccac
tcggccaaaggtctggagttcccgcaggtgtttatcgtcggcatggaagaggggatgttc
ccgagccagatgtcgctggatgagggcggccgtctggaggaggagcgtcgtctggcctat
gtaggcgtgacccgcgcgatgcaaaagctgaccctgacctatgccgaaacccgccgtctg
tacggcaaagaggtctatcaccgcccgtcacgctttgtcggcgagctgccggaggagtgc
gtggaagaggtacgcctgcgcgccagcatcagccgcccggtgagccatcagcgtctgggg
acgccggtctcggaaagcgacagcggctttaagctgggccagcgtgttcgccatgccaaa
tttggcgaaggcaccatcgtcaatctggagggtagcggcgagcacagtcgcctgcaggtg
gcgttccaggggcagggcatcaaatggctggtggccgcttacgccaagctggaaaccgtg
taa
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