Leclercia sp. W6: DVA43_20235
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Entry
DVA43_20235 CDS
T08905
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ley03009
]
DVA43_20235
Enzymes [BR:
ley01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
DVA43_20235
Ribosome biogenesis [BR:
ley03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DVA43_20235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_37
Methyltransf_25
FtsJ
MTS
Methyltransf_15
Methyltransf_5
Cons_hypoth95
DAHP_snth_FXD
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
AXF62616
LinkDB
All DBs
Position
complement(4127350..4128636)
Genome browser
AA seq
428 aa
AA seq
DB search
MKKQNLRSLAAQAIEQVVEQGQSLSNVLPPLQQKVSDKDKSLLQELCFGVLRTLPQMEWL
IGKLMARPMAGKQRVIHYLIMVGFYQLLHTRIPPHAALAETVEGAVAVKRPQLKGLINGV
LRQFQRQQDELLAEFARTEKRFLHPDWLLKRLQKAYPEQWEALINANNQRPPMWLRVNRN
HHTRDAWLALLEEAGMTGFPHPEYSDAVRLAAPAPVHALPGFEQGWVTVQDASAQGCMTW
LEPQNGERILDLCAAPGGKTTHILEVAPQANVMAVDVDEQRLSRVYDNLKRLGMKAEVKQ
GDGRTPGQWCGDEQFDRILLDAPCSATGVIRRHPDIKWLRRDRDINELAQLQSEILDAIW
PHLKTGGTLVYATCSVLPEENSQQIAAFLKRTPDARLHLTGTPELPGKQNLPGAEEGDGF
FYAKLIKE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacaaaatttacgcagcctggcagcacaggcgattgagcaagtggtcgagcag
ggtcagtccctgagcaatgtcctgccaccgttacagcaaaaggtttccgataaagataag
tcgctgcttcaggagttgtgctttggtgttctgcgcacgttaccccagatggagtggctg
atcggaaaacttatggcgcgcccgatggcgggcaagcaacgcgtcattcactacctgatc
atggtcggcttctatcagctgctgcatacccgcattccacctcatgccgcactggcagag
accgtagaaggcgcggttgcggtaaaacgcccgcagctgaaagggttgatcaacggcgtg
ttgcgacagttccaacgtcagcaagatgaattactggctgagtttgcccgcacggaaaaa
cgtttcctgcatcctgactggttattaaagcgtctgcaaaaagcctatcctgagcagtgg
gaagcgctaattaatgccaataaccagcgtccacctatgtggctacgcgttaaccgcaat
caccacacccgggatgcctggctggcattactggaagaggccgggatgaccgggttccct
catcctgaatacagcgatgcagtgcgcctggcggcccctgcaccggtacatgctctgcct
ggctttgaacagggctgggttaccgttcaggacgcttcagcccagggttgcatgacctgg
cttgagccgcagaatggcgagcggatccttgatctttgcgccgcgccaggcggtaagaca
acgcatatcctggaagtcgcaccacaggcgaacgtgatggctgtcgacgttgacgaacag
cgtctttcgcgtgtctacgataatctcaaacgtctgggtatgaaggcggaggttaagcag
ggtgacgggcgtacccctgggcagtggtgcggggatgagcagttcgatcgcattttactg
gatgccccttgctcagcgaccggcgttatccgccgccatccggatatcaaatggttgcgc
cgcgaccgggatatcaacgaactggcacagttgcagtcagagatcctcgacgctatctgg
ccgcatctgaaaacaggcgggacgctggtttatgccacctgttctgttctgccggaagag
aatagccagcagatcgccgcgttcctgaagcgcacacctgatgcccgcctgcatttaacc
ggcacaccagaactgcccggcaaacaaaacctgccaggggcagaagaaggcgacggtttc
ttttacgctaagctaatcaaagagtga
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