Leclercia sp. W6: DVA43_20865
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Entry
DVA43_20865 CDS
T08905
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ley
Leclercia sp. W6
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ley03016
]
DVA43_20865
Enzymes [BR:
ley01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DVA43_20865
Transfer RNA biogenesis [BR:
ley03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DVA43_20865
Prokaryotic type
DVA43_20865
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AXF61812
UniProt:
A0AAD0LPS6
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All DBs
Position
4252634..4253578
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPVTFSSEQLDAALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPAERMVTLEQLQALVDQAQEQGTETADLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTPNVPAQGLVRVTEGDDNAFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacgtgcacggcgtgctgctgctggataaaccg
cagggcgcatccagcaacgacgtgctgcaaaaagtaaagcgtatatataacgccaaccgc
gcggggcacaccggggcgctggatccgctggcgaccggtatgctgccgatttgtctgggt
gaagcgaccaagttttcccagtatctgctggattcggacaaacgctaccgcgtgattgcc
aagcttggccagcgcacggacacctccgatgctgatggtcaggtcgtcgaagagcgtccg
gtgacgttcagcagcgaacagcttgatgccgcgctcgagagcttccgtggcgacacccaa
caagtgccgtccatgtactcggcgctgaagtaccagggcaaaaagctctatgagtatgcg
cgtcagggaattgaggtgccacgcgaggcccgtccgattacggtctatgagctgctgttc
attcgtcacgaaggcgatgagctggagctggaagtgcattgctcaaaaggcacctatatc
cgcaccatcatcgacgatctgggtgagaagctgggctgtggcgcgcacgttatttatctg
cgccgtctggcagtcagcaagtacccggctgaacgtatggtgacgctggagcagctgcag
gcgctggtggaccaggcgcaggaacagggcacagagactgcggatctgctggacccatta
ctgatgccaatggacagtcctgcttcggactatccggttgtcaatctgccgttgacctcc
tccgtttactttaaaaacggcaacccggtgcgcacgccgaatgtcccggcgcaagggctg
gtgcgcgttacggaaggggatgacaacgccttcatcgggatgggtgaaatcgacgacgaa
ggtcgtgttgccccacgccgtctggtggttgaatatccggcataa
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