Leclercia sp. W6: DVA43_23050
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Entry
DVA43_23050 CDS
T08905
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ley
Leclercia sp. W6
Pathway
ley03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ley00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DVA43_23050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ley03400
]
DVA43_23050
Enzymes [BR:
ley01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DVA43_23050
DNA repair and recombination proteins [BR:
ley03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DVA43_23050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Helicase_RecD
Viral_helicase1
AAA_11
SH3_13
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA_16
MukB
nSTAND3
AAA_28
PhoH
UvrD_C
Herpes_Helicase
CbiA
DO-GTPase1
ATPase
Phageshock_PspD
T2SSE
DEAD
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AXF62204
UniProt:
A0AAD0LSU3
LinkDB
All DBs
Position
4672552..4674372
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AA seq
606 aa
AA seq
DB search
MTMQEHLLEAVEQRVLRRLDVQFAMMVAGNDEPAVMLAAAILSRDAGEGHVCLPLSRLRA
EAKSAALQACFALFDQEPDWTATLLRSRAVSAGDEPTPLVLTGERLYLNRMWRYERAVAS
FFSEANQPLPHDSADVQRTLNALFTSDEAVNWQKVAAAVALTRRISVISGGPGTGKTTTV
ARLLAALIQMAGEEKCRIRLAAPTGKAAARLTESLGGALQKLPLTEAQRARFPTEASTLH
RLLGAQPGSQRLRYHAGNPLHLDVLVVDEASMIDLTMMSRLIEALPPHARVIFLGDRDQL
ASVEAGAVLGDICTWASAGFTVRRAQELASMTGCEMEGNVSPVAGALRDSLCLLQKSYRF
GSDSGIGQLAAAVNRGDRHAIRSVFDGKFSDIEKKQLQSGEEYLAMLEDALQGYQHFLDS
VQQQASEAEILAAFGRYQLLCALRDGPFGVAGLNEKLEQVLAQKRRIGRQPHSRWYEGRP
VMISRNDSALGLFNGDIGIALDRGQGLRVWFQMPDGSVKSVQPSRLPEHETAWAMTVHKS
QGSEFDHAALILPNQMSPVVTRELVYTAITRARRRLSLYADEGVLTQAVTTRTERRSGLS
AIFEAL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacgatgcaggaacacttgctggaagccgtagagcagcgcgtgctgcgtcgtctggat
gtacagtttgcgatgatggtagcaggaaacgacgaaccggcggtgatgctggcggcggcg
atcttaagccgtgatgcgggagaagggcacgtttgcctgccgttgtcccggctgcgtgcc
gaggcgaaaagcgccgcgctgcaggcctgttttgcgctgtttgaccaggagccggactgg
accgctacgctgctgcgctcccgcgcggtgagcgcaggggatgaaccgacgccgctggtg
ctcaccggcgagcggctctacctcaatcggatgtggcgctatgagcgggcggtggccagc
ttctttagcgaagccaatcagccgttgccccatgacagcgccgacgttcagcgcacgctg
aatgcgctgttcacctctgatgaagccgtcaactggcaaaaggtggctgcggcagtcgcg
ttaacgcggcgtatttccgtgatttccggcggaccggggaccggcaaaacgaccaccgtc
gcccgcctgctggcggcgctgatccagatggcgggagaagagaaatgccggatccggctg
gcggcacccaccggtaaagcggccgctcgtctgaccgaatcgctgggcggcgcgctgcaa
aaactgcccctgaccgaggcccagcgcgcgcgattcccgacggaagcgagcacgctgcac
cgtttgcttggcgcgcagccgggcagccagcgcctgcgttaccatgcaggtaatccgttg
cacctggatgtgctggtggtggatgaggcgtcgatgattgacctgacgatgatgtcgcgt
ctgattgaagccctgccgcctcatgcccgggtgatcttcctcggcgatcgcgaccagctg
gcctccgtcgaagcgggcgcggtgctgggtgatatctgtacctgggccagcgccggcttt
acggtccggcgcgcgcaggagcttgccagcatgacgggatgcgagatggagggcaacgtc
agccctgtcgcgggtgcgctacgcgacagcctgtgcctgctgcaaaaaagctaccgtttt
ggcagcgattctggcatcgggcaactggcggccgcggtcaatcggggcgatcgccacgct
atccgctcggtatttgatggcaaattcagtgatattgagaaaaagcagctccagagcggg
gaagagtatctggcgatgctggaagatgccctgcaggggtatcaacattttctcgacagc
gtgcagcagcaggcctccgaagcggagatcctggcggcatttggccgctaccagctgctt
tgcgctttacgggatggccccttcggcgtcgccgggctcaatgaaaagcttgagcaggtg
ctggcgcaaaaacgccgtattggccgtcagccccattcgcgctggtatgaaggcaggccg
gtgatgatttcacgcaacgacagcgcgctgggcctgtttaacggcgatatcgggattgcg
ctggaccggggtcagggactgcgggtctggttccagatgccggacggcagcgtgaagtcc
gtgcagcccagccgcctgccggagcatgaaaccgcctgggccatgacggtgcataaatcc
cagggctctgagttcgatcacgcggcactgattttacctaaccagatgtcgcccgttgtg
acccgcgagctggtctataccgccattacccgcgcccgtcggcggttgtcgttgtatgcg
gatgaaggggtgctgacgcaggctgtcactacccgtacagagcgacgcagcgggctgagt
gcgatctttgaagccttataa
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