Lysobacter enzymogenes C3: GLE_1362
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Entry
GLE_1362 CDS
T04371
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lez
Lysobacter enzymogenes C3
Pathway
lez03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GLE_1362 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lez03000
]
GLE_1362 (alkA)
03400 DNA repair and recombination proteins [BR:
lez03400
]
GLE_1362 (alkA)
Enzymes [BR:
lez01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GLE_1362 (alkA)
Transcription factors [BR:
lez03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GLE_1362 (alkA)
DNA repair and recombination proteins [BR:
lez03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GLE_1362 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ALN56719
UniProt:
A0A0S2DEI9
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All DBs
Position
complement(1489373..1490980)
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AA seq
535 aa
AA seq
DB search
MDAPVIPAPAASLPPAHVCEQARISRDPRFDGLFFVAVTSTGIYCRPVCPAPTAKSANVK
YFGHAAACEAAGFRPCLRCRPELSPAEGAWRRGDAVVARALKLIDEGALAEQPLSALAER
VGLGERQLRRLFVDRLGAPPIGVHGTRRLLFAKQLLTETRLPITEVALAAGFGSLRRFNA
AFLEAYRMAPRDLRRRPNESPAGQGDGAGDGDALVLRLGYRPPYDLGAMLDFLRGRALPG
VEHVDEHSYTRAIGPIDAPGWLRVGAWPADKRERQHALKLELHGTAPSRLLEITNRLRRM
FDLDADPDAIGAALSVDPRLRALVRKRPGLRLPSGWDGFEISVRAILGQQVSVAAARTLA
ARVAQRYGQALPQPFGPGLTHLFPTPADLADADLAPLGLTRARADTVRTVARALLDGRVD
FRAERTLDDFVARWVALPGIGPWTAHYIAMRALGHPDAFPADDLVLQKALPEDGVRLSAK
ALGARAEAWRPWRAYGVIHTWRDSMPASLPPKPAVPVVSSASAPAVKPKKTRRAT
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccccgtcatccccgctccggccgcctcgctgccgcccgcgcacgtctgcgaa
caggcccgcatcagccgcgatccgcgtttcgacggcctgttcttcgtcgccgtcaccagt
accggcatctattgccggccggtgtgtccggcgccgacggccaagagcgccaacgtcaag
tacttcggccatgccgccgcgtgcgaggccgccggcttccgcccgtgcctgcgctgccgg
ccggaactgtcgccggccgagggcgcgtggcgccgcggcgatgcggtggtcgcgcgcgcg
ctcaagctcatcgacgaaggcgcgctcgccgaacagccgctgtcggcgctggccgaacgc
gtcggtctcggcgaacggcaactgcgccggctgttcgtcgatcgcctgggcgcgccgccg
atcggcgtgcacggcacccgccggctgctgttcgccaaacagctgttgaccgaaacccgc
ctgccgatcaccgaagtcgcgctcgccgccggtttcggcagcctgcgccgtttcaacgcc
gccttcctcgaggcctaccgtatggcgccgcgcgatctgcgccggcggccgaacgaatca
ccggcgggccaaggcgacggcgcgggcgacggcgacgcgctggtgctgcggctgggctac
cggccgccgtacgacctgggcgcgatgctcgatttcctgcgcggacgcgcccttcccggg
gtcgagcatgtcgacgaacacagctacacccgcgcgatcggcccgatcgacgcgcccggc
tggttgcgcgtcggcgcgtggcccgcggacaagcgcgaacgccagcacgcgctgaagctg
gagttgcacggcaccgcgccgtcgcgcctgctggagatcaccaaccgcctgcgccgcatg
ttcgacctcgatgccgaccccgacgcgatcggcgcggcgctgtcggtggacccgcgcctg
cgcgcgctggttcgcaagcgtcccggcctgcgcctgcccagcggctgggacggcttcgag
atctcggtgcgcgcgatcctcggccagcaggtcagcgtcgccgccgcgcgcacgctggcc
gcgcgcgtggcccaacgctacggccaggccctgccgcagccgttcggccccggcctcacc
cacctgtttccgaccccggccgacctggccgatgccgacctcgctccgctcggcctgacc
cgcgcgcgcgccgacaccgtgcgcaccgtcgcccgcgccctgctcgacgggcgcgtcgac
ttccgcgccgagcgcaccctcgacgacttcgtcgcgcgctgggtcgcgctgccgggcatc
ggcccgtggaccgcgcactacatcgccatgcgcgcgctcggccatcccgatgcgtttccc
gccgacgatctggtgctgcagaaagctctgccggaggacggcgtgcgcctgagcgcgaaa
gcgctcggcgcgcgcgccgaagcgtggcggccgtggcgcgcttacggcgtgatccacacc
tggcgcgacagcatgccggcgtcgttgccgccaaaaccggccgtcccggtcgtctcctcc
gcgtccgcgcctgcggtcaagcccaagaaaacccggcgggccacatga
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