Lysobacter enzymogenes C3: GLE_2180
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Entry
GLE_2180 CDS
T04371
Name
(GenBank) Polyribonucleotide nucleotidyltransferase, RNA binding domain
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
lez
Lysobacter enzymogenes C3
Pathway
lez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLE_2180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lez03019
]
GLE_2180
03016 Transfer RNA biogenesis [BR:
lez03016
]
GLE_2180
Enzymes [BR:
lez01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GLE_2180
Messenger RNA biogenesis [BR:
lez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GLE_2180
Transfer RNA biogenesis [BR:
lez03016
]
Prokaryotic type
tRNA degradation factors
GLE_2180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_N4BP1_2nd
S1_2
KH_5
DUF7680
S1CSD-TOTE-1
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ALN57529
UniProt:
A0A0S2DGA3
LinkDB
All DBs
Position
2365914..2368022
Genome browser
AA seq
702 aa
AA seq
DB search
MAKITKTFQYGNHQVTLETGEIARQAGGAVIVKMDDTVLLVTAVAAKSAREGQDFFPLTV
DYQEKFYAGGRIPGGFFKREGRATEKETLISRLIDRPIRPLFPEDYRNEVQIIATVMSLN
PEVDGDIPALIGASAAMALAGTPFQGPIGAAKVGYKNGQYLLNPTAAELADSDLELVVAG
TSNAVLMVESEANMLSEEVMLGAVMFGHREMQKVINVINELVVEAGTKPSSWEAPAKNEA
LIGALKEAVGDQLAGAFQVRDKLQRRDAIGAIKKDVLLSLAGRAESEGWSSGELSKEFGE
LEYQTMRSSVLDTKIRIDGRALDTVRPISSKVGVLPRTHGSSLFTRGETQAIVVATLGTA
RDGQIIDAVSGEYKEHFLFHYNFPPFSVGECGRMMGPKRREIGHGRLAKRGVLAVMPSME
AFPYTIRVVSEITESNGSSSMASVCGSSLALMDAGVPIKAPVAGIAMGLVKEGDNFVVLS
DILGDEDHLGDMDFKVAGTSEGISALQMDIKIQGITEEIMKVALEQAKAGRLHILGEMAH
AITESRSELSEYAPRLLTMKIHPDKIREVIGKGGSTIQAITKETGTQIDIQDDGTIVIAS
VNAAAAQAAKSRIDQIVSDVEPGRIYEGKVAKIMDFGAFVTILPGKDGLVHVSQISSERV
EKVSDKLKEGDVVKVKVLEVDKQGRIRLSIKAVEEGEGVSAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaattaccaagaccttccagtacggcaaccatcaggtgaccctggagaccggc
gagatcgcccgtcaggccggcggcgccgtcatcgtcaagatggacgacaccgtgctgctg
gtgaccgccgtcgccgccaagagcgcgcgcgaggggcaggatttcttcccgctcaccgtc
gattaccaggagaagttctacgccggcggccgcatcccgggcggcttcttcaagcgcgag
ggccgcgcgacggagaaggaaaccctgatctcgcgcctgatcgaccgtccgatccgcccg
ctgttcccggaagactaccgtaacgaagtgcagatcatcgccacggtgatgtcgctgaat
ccggaagtcgacggcgacattccggcgctgatcggcgcctcggccgcgatggcgctggcc
ggcaccccgttccagggcccgatcggcgcggccaaggtcggttacaagaacggccagtac
ctgctcaacccgaccgccgccgagctggccgactccgacctggaactggtcgtggccggc
acctccaacgcggtgctgatggtcgaatccgaagccaacatgctgtccgaagaggtcatg
ctcggcgcggtgatgttcggccatcgcgagatgcagaaggtcatcaacgtcatcaacgag
ctggtcgtcgaagccggcaccaagccgtcgagctgggaagctccggccaagaacgaagcg
ctgatcggcgcgctcaaggaagcggtgggcgaccagctcgccggcgccttccaggtgcgc
gacaagctgcagcgccgcgacgccatcggcgcgatcaagaaggacgtgctgctgtcgctg
gccggccgcgccgaatccgagggctggtcctcgggcgaactgtcgaaggaattcggcgag
ctcgaataccagaccatgcgcagctcggtgctcgacaccaagatccgcatcgacggccgc
gcgctcgacaccgtgcgcccgatctcctcgaaggtcggcgtgctgccgcgcacccacggc
tcctcgctgttcacccgcggcgagacccaggccatcgtggtcgccaccctcggcaccgcg
cgcgacggccagatcatcgacgccgtctcgggcgagtacaaggaacacttcctgttccac
tacaacttcccgcccttctcggtcggcgagtgcggccgcatgatgggcccgaagcgccgc
gaaatcggccacggccgtctcgccaagcgcggcgtgctcgcggtgatgccgagcatggaa
gcgttcccgtacaccatccgcgtggtctcggaaatcaccgagtcgaacggctcgtcctcg
atggcttcggtctgcggcagctcgctggcgctgatggacgccggcgtgccgatcaaggcg
ccggtcgccggcatcgcgatgggcctggtcaaggaaggcgacaacttcgtcgtcctgtcc
gacatcctgggcgatgaagaccacctcggcgacatggacttcaaggtcgccggcacgtcg
gaaggcatctcggcgctgcagatggacatcaagatccagggcatcaccgaagagatcatg
aaggtcgcgctggagcaggccaaggccggccgcctgcacatcctcggcgagatggcccac
gccatcaccgagtcgcgctcggagctgtccgagtacgcgccgcgcctgctgacgatgaag
atccacccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcgatc
accaaggaaaccggcacccagatcgacatccaggacgacggcaccatcgtcatcgcctcg
gtcaacgccgccgccgcgcaggccgccaagtcgcgcatcgaccagatcgtctccgacgtc
gagccgggccgcatctacgaaggcaaggtcgccaagatcatggacttcggcgcgttcgtg
accatcctgccgggcaaggacggcctggtgcacgtgtcgcagatctccagcgagcgcgtc
gagaaggtctccgacaagctcaaggaaggcgacgtggtcaaggtcaaggtgctggaagtc
gacaagcagggccgcatccgcctgtcgatcaaggccgtggaagaaggcgagggcgtgtcg
gccgaataa
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