KEGG   Lysobacter enzymogenes C3: GLE_3116
Entry
GLE_3116          CDS       T04371                                 
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
lez  Lysobacter enzymogenes C3
Brite
KEGG Orthology (KO) [BR:lez00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lez03016]
    GLE_3116 (ligT)
Enzymes [BR:lez01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     GLE_3116 (ligT)
Transfer RNA biogenesis [BR:lez03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    GLE_3116 (ligT)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: ALN58463
UniProt: A0A0S2DJK8
LinkDB
Position
complement(3485855..3486448)
AA seq 197 aa
MHQSSLFGDPAPRQPAELHRLFFALWPDAGVRARIRERALALEAAQRPGGRLIGAHRYHL
TLQFLGDFAELPQALAQRAGVAAAAVRADAFDFALDRAGSFANRDIPWWLGSAEPNPSLA
ALWDRLGVALAKQGVKVVASHRAHAPHVTVVREAAHGMSAPLAIDPVMWRIDRFVLLHSV
LGKRNEYSLLGEWPLDG
NT seq 594 nt   +upstreamnt  +downstreamnt
atgcatcagtcttccctgttcggcgatcccgcgccgcgccagcccgccgaattgcaccgc
ctgttcttcgccctgtggcccgacgccggcgtgcgcgcgcggatccgcgagcgcgcgctg
gcgctggaggcggcgcagcgacccggcgggcgcctgatcggcgcccatcgctatcacctc
accctgcaatttctcggcgatttcgccgaactgccgcaagcgctggcgcagcgcgccggc
gtcgcggccgccgcggtgcgcgccgacgccttcgatttcgcgctggaccgcgccggcagc
ttcgccaaccgcgacattccgtggtggctgggtagcgccgaaccgaatccgtcgttggcg
gcgctgtgggaccggctcggcgtggccctggccaagcagggcgtcaaggtcgtcgccagc
caccgcgcgcacgcgccgcacgtcaccgtcgtgcgcgaggcggcgcacgggatgagcgcg
ccgctggcgatcgatccggtgatgtggcggatcgaccgcttcgtgctgctgcacagcgtg
ctcggcaagcgcaacgagtactcgctgctgggcgagtggccgctggacggctga

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