Lysobacter enzymogenes C3: GLE_3116
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Entry
GLE_3116 CDS
T04371
Symbol
ligT
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
lez
Lysobacter enzymogenes C3
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lez03016
]
GLE_3116 (ligT)
Enzymes [BR:
lez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
GLE_3116 (ligT)
Transfer RNA biogenesis [BR:
lez03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
GLE_3116 (ligT)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ALN58463
UniProt:
A0A0S2DJK8
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All DBs
Position
complement(3485855..3486448)
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AA seq
197 aa
AA seq
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MHQSSLFGDPAPRQPAELHRLFFALWPDAGVRARIRERALALEAAQRPGGRLIGAHRYHL
TLQFLGDFAELPQALAQRAGVAAAAVRADAFDFALDRAGSFANRDIPWWLGSAEPNPSLA
ALWDRLGVALAKQGVKVVASHRAHAPHVTVVREAAHGMSAPLAIDPVMWRIDRFVLLHSV
LGKRNEYSLLGEWPLDG
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgcatcagtcttccctgttcggcgatcccgcgccgcgccagcccgccgaattgcaccgc
ctgttcttcgccctgtggcccgacgccggcgtgcgcgcgcggatccgcgagcgcgcgctg
gcgctggaggcggcgcagcgacccggcgggcgcctgatcggcgcccatcgctatcacctc
accctgcaatttctcggcgatttcgccgaactgccgcaagcgctggcgcagcgcgccggc
gtcgcggccgccgcggtgcgcgccgacgccttcgatttcgcgctggaccgcgccggcagc
ttcgccaaccgcgacattccgtggtggctgggtagcgccgaaccgaatccgtcgttggcg
gcgctgtgggaccggctcggcgtggccctggccaagcagggcgtcaaggtcgtcgccagc
caccgcgcgcacgcgccgcacgtcaccgtcgtgcgcgaggcggcgcacgggatgagcgcg
ccgctggcgatcgatccggtgatgtggcggatcgaccgcttcgtgctgctgcacagcgtg
ctcggcaagcgcaacgagtactcgctgctgggcgagtggccgctggacggctga
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