Lysobacter enzymogenes C3: GLE_3643
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Entry
GLE_3643 CDS
T04371
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
lez
Lysobacter enzymogenes C3
Pathway
lez00521
Streptomycin biosynthesis
lez00523
Polyketide sugar unit biosynthesis
lez00525
Acarbose and validamycin biosynthesis
lez00541
Biosynthesis of various nucleotide sugars
lez01055
Biosynthesis of vancomycin group antibiotics
lez01100
Metabolic pathways
lez01110
Biosynthesis of secondary metabolites
lez01250
Biosynthesis of nucleotide sugars
Module
lez_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GLE_3643 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GLE_3643 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GLE_3643 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GLE_3643 (rfbB)
00525 Acarbose and validamycin biosynthesis
GLE_3643 (rfbB)
Enzymes [BR:
lez01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GLE_3643 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
adh_short
Motif
Other DBs
NCBI-ProteinID:
ALN58987
UniProt:
A0A0S2DK10
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All DBs
Position
complement(4053445..4054497)
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AA seq
350 aa
AA seq
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MPTWLVTGGAGFIGGNFVLDAVRRGVKVVNLDLLTYAGNRDTLAPLDGEAGHAFVQGDIG
DAGLVGRLLAEHRPDAIVNFAAESHVDRSIDGPAAFVHTNVVGTLSLLEQARDYWKSLDA
AGRDGFRFLHVSTDEVYGSLGENGKFSETTPYAPNSPYSASKAASDHLVRAFHHTYGLPT
LTTNCSNNYGPYQFPEKLIPLVIAKALAGEALPVYGDGMNVRDWLYVGDHCAAIARVLEA
GRVGETYNVGGDAERPNLTVVKTICALLDARRPLADGRARESLIAFVADRPGHDRRYAID
ASKLKNELGWAPTVTFEQGIERTVEWYLSNQEWVRRVLDGSYRLERIGQA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
gtgcccacctggctagtgaccggcggcgccggtttcatcggcggcaacttcgtcctcgac
gcggtgcgccgcggcgtcaaggtcgtcaacctcgacctgctcacctacgccggcaaccgc
gacaccctggcgccgctggacggcgaggcggggcacgcgttcgtccagggcgacatcggc
gacgccgggctggtcgggcggctgctggccgagcaccgcccggacgcgatcgtcaacttc
gccgccgagagccatgtcgaccgctccatcgacggcccggccgcgttcgtgcataccaac
gtggtcggcacgctgagcctgctggagcaggcgcgcgattattggaagtcgctcgacgcc
gccggccgcgacgggttccggttcctgcacgtgtccaccgacgaggtctacggctcgctc
ggcgagaacggcaagttcagcgagaccacgccgtacgcgccgaattcgccgtattccgcg
tccaaggcggcctctgaccatctggtgcgggcgttccaccacacctacggcctgccgacg
ctgaccaccaactgctccaacaactacggcccgtaccagttcccggaaaaactcatcccg
ctggtgatcgccaaggccctcgccggcgaagccctgccggtctacggcgacggcatgaac
gtgcgcgactggctgtacgtgggcgaccactgcgcggcgatcgcgcgcgtgctcgaagcc
gggcgggtcggcgagacctacaacgtcggcggcgacgccgagcgccccaacctgaccgtg
gtcaagaccatctgcgcgctgctcgacgcgcgtcgtccgctcgccgacggccgcgcgcgc
gagtcgctgatcgccttcgtcgccgaccgtccgggccacgaccgccgttacgccatcgat
gcgtccaagctcaagaacgaactcggctgggcgccgacggtgaccttcgaacaaggcatc
gagcgcaccgtcgagtggtacctgagcaatcaagagtgggtgcggcgcgtgctcgacggc
agctatcggctcgaacgcatcggccaggcctga
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