Lysobacter enzymogenes C3: GLE_4918
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Entry
GLE_4918 CDS
T04371
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lez
Lysobacter enzymogenes C3
Pathway
lez03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GLE_4918 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lez03021
]
GLE_4918 (rho)
03019 Messenger RNA biogenesis [BR:
lez03019
]
GLE_4918 (rho)
Transcription machinery [BR:
lez03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GLE_4918 (rho)
Messenger RNA biogenesis [BR:
lez03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GLE_4918 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
AAA
Spore_III_AA
OB_RNB
S1CSD-TOTE-2
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALN60259
UniProt:
A0A0S2DP93
LinkDB
All DBs
Position
5481722..5483515
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AA seq
597 aa
AA seq
DB search
MSDKTPDAGETAEKRVRKPRASKAAEAAPAVVADASPLIPAPMPASEPAPAPTPRAAKAA
APAASAGESAPAASGAAETAAPQHAGNGQPAGEGGGTANNNPQQSQQQGQQNQGGQQRDG
GFDNRGGNNRRDRFRNRRDRERNNRQQQRGGNGGEDFGDNGENFVPRPHPQVPEGFPQYS
LGDLKRMPAPKLLDLADQLSIQEGVARARKQDVIFALLKVLTRHGEGVAADGVLEILPDG
FGFLRAAEASYLAGPDDTYISPSQIRRFNLRTGDHLSGRIRFPKDGERYFALSVVDSING
EPLEASKNKVLFENLTPLFPRKRFRLERGDGSTEDITGRILDLMAPQGKGQRALIVSPPK
AGKTMMMQQVATAITHNHPDVHLIVLLVDERPEEVTEMQRTVRGEVVSSTFDEPAARHVQ
VAEMVIERAKRLVEHKKDVVILLDSITRLARAYNNVVPSSGKVLSGGVDANALHRPKRFF
GAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNSEVHLNRRIAEKRVYPAIDIN
RSGTRREDLLIEPELLQKIWILRKLLHGMDEIGAMEFLLDKMKTTKSNDEFFSSMKR
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgtccgataagacccccgacgctggcgaaaccgccgagaagcgcgtgcgcaagccgcgc
gccagcaaggccgccgaagccgctccggccgtcgtcgccgatgccagccccctgattccc
gcgccgatgcccgcgagcgaacccgctccggcgccgacgcctcgcgcggccaaggccgcc
gccccggccgccagcgccggcgagtccgctccggccgcctccggcgccgccgagaccgcc
gcgccgcagcacgccggcaacggccagccggccggcgaaggcggcggcacggccaacaac
aacccgcaacagtcgcagcagcaaggccagcagaaccagggcggccagcagcgcgacggc
ggcttcgacaaccgcggcggcaacaaccgccgcgaccgcttccgcaaccgccgcgaccgc
gagcgcaacaaccgccagcagcagcgcggcggcaacggcggcgaggatttcggcgacaac
ggcgagaacttcgtcccgcgtccgcacccgcaggtgcccgagggcttcccgcagtactcg
ctgggcgacctcaagcgcatgccggcgccgaagctgctcgacctggccgaccagctcagc
atccaggaaggcgtcgcccgcgcgcgcaagcaggacgtgatcttcgccctgctcaaggtg
ctgacccgccacggcgaaggcgtcgccgccgacggcgtgctggaaatcctgcccgacggc
ttcggcttcctgcgcgcggccgaggccagctacctggccggcccggacgacacctacatc
tcgccgagccagatccgccgcttcaacctgcgcaccggcgaccatctgtccggccgcatc
cgcttccccaaggacggcgagcgctacttcgccctgtcggtggtcgacagcatcaacggc
gagccgctggaagcgtcgaagaacaaggtcctgttcgagaacctgaccccgctgttcccg
cgcaagcgcttccgcctggagcgcggcgacgggtccaccgaggacatcaccggccgcatc
ctcgacctgatggcgccgcagggcaaaggccagcgcgcgctgatcgtctcgccgccgaag
gccggcaagaccatgatgatgcagcaggtcgccaccgcgatcacccacaaccatcccgac
gtgcacctgatcgtgctgttggtcgacgagcgtccggaagaagtgaccgaaatgcagcgc
accgtgcgcggcgaagtggtctcctcgaccttcgacgaaccggccgcgcgccacgtgcag
gtcgccgagatggtgatcgagcgcgccaagcgcctggtcgaacacaagaaggacgtggtg
atcctgctcgactcgatcacccgcctggcccgcgcctacaacaacgtcgtgccgagttcg
ggcaaggtgctgtcgggcggcgtcgacgccaacgccctgcaccgtcccaagcgcttcttc
ggcgccgcgcgcaacgtcgaagaaggcggctcgctgacgatcatcgcgaccgcgctgatc
gacaccggcagcaagatggacgaggtgatctacgaagagttcaagggcaccggcaactcg
gaagtccacttgaaccgccgcatcgccgaaaagcgcgtgtacccggcgatcgacatcaac
cgctcgggcacccgccgcgaagacctgttgatcgagccggaactgctgcagaagatctgg
atcctgcgcaagctgctgcacggcatggacgagatcggcgcgatggaattcctgctggac
aagatgaagacgaccaagtcgaacgacgagttcttcagctcgatgaagcgctga
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