Lysobacter enzymogenes C3: GLE_5231
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Entry
GLE_5231 CDS
T04371
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
lez
Lysobacter enzymogenes C3
Pathway
lez03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lez00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GLE_5231 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lez03400
]
GLE_5231 (recB)
Enzymes [BR:
lez01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GLE_5231 (recB)
DNA repair and recombination proteins [BR:
lez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GLE_5231 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALN60572
UniProt:
A0A0S2DPU2
LinkDB
All DBs
Position
complement(5831378..5835028)
Genome browser
AA seq
1216 aa
AA seq
DB search
MSAPESSRHESGKHGPVKHGLAARDPFLDLPLDGLRLIEASAGTGKTYTLATLVARLVIE
RGLGVSRILAVTFTDAATQELRERLRRRLLLAARIAADDPALAEADDDAERALTRALVRA
QADIEGEAALRARLQRAAREIDLAAVVTIHGFCARVLAEHALETGQPFAAPELIGSEREL
LDEIAVDLWRAFGNDAGEAELLALQWPGGPPSLAADLGALLRTPLLLPAAPASSQDPLAE
LDRAGAALRDAFAAHADDAFAALAAAIAGKALNGNSYRAHLPDELRAQLRAWCANGDWSQ
PLDERVAKLAPSALASKANKGKEAQVPASPLFDAVARYLDAAQQREQWLAGQRLALAHRI
RAAAAQRLAELKRVRRVQSFDDLIADVASALEGPHGEALARRLREQYAVALVDEFQDTDP
RQWAIFRRVFGEAAREDDSPAGAGLFLIGDPKQAIYGFRGGDVHTYLSAAAQAEAAPPLD
HNFRSRPSLLRAIAALYAQAGEAAFIDPRIRFREVEAGGAVADEDLQRAGATAPALVLRA
LPAPDDGRKTPVWSSPESRELAARACIAAIHGWLADARDGRATIQGRPLRPADIAVLVRS
HEEAASIQRALGAAGIAAVAAGRRSLFATEQAMETLTLFDALLHPGDSGRLRAALATPLL
GLDGAAVAHVAADEAEQARWQAQALQWRERWQRHGPLALLADLCAQQAPRLLALGDGERR
LTNLLQLAETLQEADRRALGLHGLRDWLRLRIAEADDSDEKQQLRLESDAHRVQILTLHK
SKGLEFGLVFLPFVALGREPRSGRWCEYPDPEHGRVMQLQSDVFDPDAPQWQDASERAAQ
EARAEDARLLYVGLTRARHALWIATGPLYHAALSPLQPMLADPAALAREPGVAIDAAAIE
PPPRPLPPAAAGAVPPAREARARAARDWWVYSFTQLTNEDSGFDPAAQDERGAEDEPQAA
PDLAAAAPLPGDARFGGSRFGNVVHSALERVDFAAWRDWRDGDAPPPGQDEALAAAMRSE
GYAEADIDDGLALLASLVGRTLVAPLPEGARLCDVPEPARRSEMEFHFGLDAAPVDALLA
ALHAHGQVRERRGFGSRRRLEGLMTGKIDLVYTHEGRYYVLDYKTNRLPGFDAAQVERAM
AESEYDLQSLIYTVALHRWLRFRLGPDYDYERDFGGVRYLFCRGLDAADPGAGVHAAKPP
RALIEAMDALFAGAAR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcgcccgaatcctccaggcacgaatccggcaagcacggacccgtcaagcacgga
ctcgccgcgcgcgatcccttcctcgacctgccgctcgacggcctgcgcctgatcgaggcc
agcgccggcaccggcaagacctacaccctggccacgctggtggcgcggctggtgatcgag
cgcggcctcggcgtgagccggatcctggcggtgaccttcaccgacgctgcgacccaggag
ctgcgcgaacgcctgcgccggcgcctgctgctggccgcgcgcatcgccgcggacgatccc
gcgctggccgaagccgacgacgatgccgagcgtgcgctgacccgcgcgctggtgcgcgcg
caggccgacatcgaaggcgaagcggcgctgcgcgcgcggctgcagcgcgccgcgcgcgag
atcgacctggccgcggtggtcaccatccacggcttctgcgcgcgcgtgctcgccgagcac
gcgctggaaaccggccagccgttcgccgcgcccgagctgatcggcagcgagcgcgagctg
ctcgacgagatcgcggtggacctgtggcgcgcgttcggcaacgacgccggcgaagccgaa
ctgctggcgctgcaatggccgggcgggccgccgtcgctggccgccgacctgggcgcgttg
ctgcgcacgccgctgctgctgccggccgcgccggcttcgagccaggacccgctggccgaa
ctcgaccgcgccggcgccgcgctgcgcgacgcgttcgccgcgcacgccgacgacgccttc
gccgcgctggccgcggcgatcgccggcaaggcgctcaacggcaacagctaccgcgcccat
ctgcccgacgaactgcgcgcgcagttgcgagcctggtgcgccaacggcgactggtcgcag
ccgctggacgagcgcgtggccaagctcgcgccgtccgcgctggcgtcgaaagccaacaag
ggcaaggaagcgcaggtgccggcctcgccgctgttcgacgcggtcgcgcgctacctcgac
gccgcgcagcagcgcgagcagtggctggcgggacagcgcctggcgctggcgcaccgcatc
cgcgcggcggcggcgcagcgcctggccgaactcaagcgggtgcggcgggtacagagcttc
gacgatctcatcgccgatgtcgccagcgcgctggaagggccgcacggcgaggcgctggcg
cggcgcctgcgcgagcagtacgcggtggccctggtcgacgagttccaggacaccgatccg
cgccagtgggcgatcttccgccgggtgttcggcgaagccgcgcgcgaggacgattcgccc
gccggcgccgggctgttcctgatcggcgatcccaagcaggccatctacggcttccgcggc
ggcgacgtgcacacctacctcagcgccgccgcgcaggccgaggcggcgccgccgctggac
cacaacttccgctcgcggccgtcgctgctgcgcgcgatcgccgcgctgtacgcccaggcc
ggcgaggcggccttcatcgatccgcgcatccgcttccgcgaggtcgaggccggcggcgcg
gtcgccgacgaagacctgcagcgcgccggcgcgaccgcgccggcgctggtattgcgcgcg
ctgccggcgccggacgacgggcgcaagacgccggtgtggagctcgccggaatcgcgcgag
ctggccgcgcgcgcttgcatcgccgcgatccacggctggctcgccgacgcgcgcgacggc
cgcgccacgatccagggccggccgctgcgcccggccgacatcgcggtgctggtgcgcagc
cacgaagaagccgcatcgatccagcgcgcgctcggcgcggccggcattgccgcggtcgcc
gccggccgccgcagcctgttcgcgaccgagcaggcgatggaaacgctgaccctgttcgac
gcgctgctgcatcccggcgacagcggccgcctgcgcgcggcgctggcgacgccgctgctc
ggcctggacggcgccgccgtcgcgcatgtcgccgccgacgaagccgaacaggcgcgctgg
caggcgcaggcgctgcaatggcgcgagcgctggcagcgccacggtccgctggccctgctc
gccgacctgtgcgcgcaacaggcgccgcggctgctggcgctgggcgacggcgagcgccgg
ctgaccaatctgctgcagctggccgagaccctgcaggaagccgaccgtcgcgcgctcggc
ctgcacggcctgcgcgactggctgcgcctgcgcatcgccgaggccgacgacagcgacgag
aagcagcagctgcggctggaatcggatgcgcatcgggtgcagatcctgaccctgcacaag
agcaagggcctggagttcggcctggtgttcttgccgttcgtggcgctgggccgcgagccg
cgcagcggacgctggtgcgaataccccgatcccgagcacggccgggtgatgcagctgcaa
agcgacgtattcgatccggacgcgccgcagtggcaggacgccagcgagcgcgccgcgcag
gaagcccgcgccgaggacgcgcgcctgctctacgtcggcctgacccgcgcgcgccatgcg
ctgtggatcgcgaccgggccgctgtaccacgccgcgctgtcgccgctgcagccgatgctg
gccgatcccgcggcgctggcgcgcgagcccggcgtggcgatcgacgccgccgcgatcgag
ccgccgccgcggccgctgccgccggccgcggccggcgcggtgccgccggcgcgcgaggcg
cgcgcgcgcgccgcgcgcgactggtgggtctacagcttcacccagctgaccaacgaagac
agcggtttcgacccggccgcgcaggacgagcgcggcgccgaggacgaaccgcaggcggcg
cccgacctcgccgcggccgcgccgctgcccggcgacgcgcgcttcggcggcagccgcttc
ggcaacgtcgtgcacagcgcgctcgaacgcgtggacttcgccgcatggcgcgattggcgc
gacggcgatgcgccgccgccgggccaggacgaggcgctggccgcggccatgcgcagcgag
ggctacgccgaggccgacatcgacgacggcctggcgttgctggcctcgctggtcggccgc
accctggtcgcgccgctgcccgagggcgcgcgcctgtgcgacgtgcccgagccggcccgg
cgcagcgaaatggagttccatttcggcctcgacgccgcgccggtggacgcgctgctggcg
gcgctgcacgcgcacggacaggtgcgcgaacgccgcggcttcggttcgcgccggcgcctg
gaaggcctgatgaccggcaagatcgatctggtctatacgcacgagggccgctattacgtg
ctcgactacaagaccaaccgcctgcccggcttcgacgccgcgcaggtcgagcgcgccatg
gccgaaagcgagtacgacctgcaatcgctgatctacaccgtcgccctgcaccgctggctg
cgcttccgcctcggcccggactacgactacgaacgcgacttcggcggcgtgcgctatctg
ttctgccgcggcctcgacgccgccgatccgggcgccggcgtgcatgcggccaagccgccg
cgcgcgctgatcgaggcgatggacgcgctgtttgccggagcggcgcgatga
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