Legionella fallonii: LFA_2874
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Entry
LFA_2874 CDS
T03771
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lfa
Legionella fallonii
Pathway
lfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFA_2874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfa03019
]
LFA_2874
03009 Ribosome biogenesis [BR:
lfa03009
]
LFA_2874
Enzymes [BR:
lfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LFA_2874
Messenger RNA biogenesis [BR:
lfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LFA_2874
Ribosome biogenesis [BR:
lfa03009
]
Prokaryotic type
rRNA processing factors
LFA_2874
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
CEG58229
UniProt:
A0A098G8C0
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All DBs
Position
I:3157607..3159649
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AA seq
680 aa
AA seq
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MVTIPVGALHYLSLNVCALIMGLQMEKMLINAMQTEEVRVALIKNNHLFDLDIECPGEIK
KKGNIYKAIVTRREPSLDAVFVEYGSKRQGFLPLKEIAPEYLSKNPDDFGDDKPPITALI
REGQELLVQVDKEERGNKGAALTTFITLAGCYLVLMPNNPRSGGISRRIEGDERDELRET
LNALTLPEDMGLIIRTAGVGKSQEELQDDLDMLCNQWQAIKQAYTSELAPCLIHQEGDVI
IRSIRDNLRKSISEIIIDDQISYIKAKQYIERVKPEFLPNLKLYNSSIPLFNFYQIESQI
ETAYQRQVMLPSGGALVIDRTEALVSIDINSAKATGGSDIEATALNTNLEAADEIARQLR
LRDLGGLVVIDFIDMSSSKNQRDVENRLKEALQADRARIQVGRISRFGLLEMSRQRLRLS
LGETAQEICPRCEGRGTVRNIQSHGLSITRLIEEEALKEKTAEIQVQLPAEMATFIMNEK
RNFIRDIEKRHDVSVIIIANPYLQSPQYTITRLKEDNVGKSKKPSYTLIQQPEPHVVSSN
PQDVPHDEPAVKQFVEHTTVKHPSTSFIKRLWTSLFGGHAASSTQEQSKKQQHRAPGASK
TTSRSSNDRRGQSNPNRRRRSGGNQQRTSGGTTSNPNQQRRKPASNQQAQGGQQGNRSAA
AKNEGNRKKEASLAREPTEK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggtaacaatccctgtaggagccttacactatctcagcttaaatgtctgcgccctaatt
atggggttacagatggaaaaaatgttaatcaacgcaatgcaaacagaagaagttcgcgtt
gcactcattaaaaacaatcatttatttgatctggacatagaatgtccaggagagataaaa
aagaaaggaaatatatataaagccatagtcactcgacgtgaacctagccttgatgctgtt
tttgttgaatacggctctaaacgtcaaggttttttaccattaaaagaaattgctcctgaa
tatttaagtaaaaatcctgatgactttggcgatgacaaacctccgatcactgcattaatc
cgtgagggacaagaattattagtccaggtagataaagaagaacgaggcaataaaggtgct
gcgttgaccacttttattactcttgccggttgttatttagtattaatgcctaataatcct
cgctctggcggcatctctagacgcattgaaggggacgagcgtgatgagttacgggaaacc
ttaaatgcactcacgttacctgaagatatgggacttattattcgcactgcaggcgttgga
aaaagccaagaagagctacaagatgatttggacatgttgtgcaaccagtggcaagcaatc
aaacaagcttacacatcagaactagccccttgtttgattcatcaagaaggcgatgtcatt
attcgctccatacgtgataatttacgtaagtccattagtgaaattattattgatgatcaa
atttcctatattaaagccaagcaatatatcgaacgagtaaagcctgagtttttacctaat
ttgaagctctataatagtagcatccctctatttaatttttatcaaattgaaagtcaaata
gaaacagcatatcaacgacaagtgatgttgccctctggcggagcactagttatagacaga
accgaagctctagtatcaattgacatcaactctgcaaaagcaacaggtggttcagatatt
gaagccacggccttaaatactaacctggaagcggcggatgaaattgcacgtcaattacgt
ttacgtgatttgggcggattagtcgttatcgattttatcgatatgagttctagcaaaaac
caacgtgatgttgaaaatcgcttgaaagaagccttacaagcagatagagcaagaatacaa
gtaggccgtatttcgcgttttggcctcttagaaatgtctcgccaacgtttaagattgtcc
cttggtgaaacagctcaggaaatttgtcctcgttgtgaaggacgaggaacagtgcgtaac
attcagtctcatggcttatcaattacgcgccttattgaagaagaagcccttaaagagaag
accgctgaaatacaagtacaacttccagcagaaatggctactttcatcatgaatgaaaaa
cgcaatttcataagagacattgaaaaaagacatgatgttagcgttattatcattgctaat
ccttatctgcaatcgcctcaatacactattactcgtttgaaagaggataatgtaggaaaa
tcgaagaaaccaagttataccttaattcagcaaccagaacctcacgtagtcagtagcaac
ccgcaagacgtaccgcatgatgagccagcagtaaaacaatttgttgaacacactactgta
aaacatccatcaaccagttttatcaaacgtttatggactagcttatttggtgggcatgct
gcatcctctactcaggaacagtctaaaaaacaacaacaccgagcgcctggagcatcaaaa
acaacatctcgaagttctaacgacagacgaggtcaaagtaatccaaatcgcagacgtcga
tctggcggaaatcaacagcgtactagtggtggcactacgtctaatcccaatcaacaacga
agaaaacctgcttccaatcaacaagcccaaggtggacagcaaggaaatcgatccgctgca
gctaagaatgaaggcaatagaaaaaaagaagcttcattagctagagaaccgacagaaaag
tag
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