Legionella fallonii: LFA_3706
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Entry
LFA_3706 CDS
T03771
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
lfa
Legionella fallonii
Pathway
lfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LFA_3706 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfa03021
]
LFA_3706 (rho)
03019 Messenger RNA biogenesis [BR:
lfa03019
]
LFA_3706 (rho)
Transcription machinery [BR:
lfa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LFA_3706 (rho)
Messenger RNA biogenesis [BR:
lfa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LFA_3706 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
AAA_22
NACHT
S1CSD-TOTE-2
ATPase_2
AAA
TAD2
Motif
Other DBs
NCBI-ProteinID:
CEG59030
UniProt:
A0A098GAI0
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All DBs
Position
I:complement(4086236..4087498)
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AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQEMGVENTSRMRKQDIIFAILKAHALKGEDIHGDGVLEVLTD
GFGFLRSSDGSYLAGPDDIYVSPSQIRRFGLRSGDTISGKIRPPKDSERYFALLKVDQIN
YDTPDSAKRKILFENLTPLFAAERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIARSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLSPEDLQRTWILRKILQSMDECDAIEFLLERMKNHKTNAEFFDAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattacctattgccgatctcgttaacatcgcacaagaa
atgggggtagaaaatacctctcgtatgcgcaagcaagacattattttcgccattcttaag
gcccatgctttaaaaggagaagacatccacggtgatggcgttttagaagttttgaccgat
ggcttcggattcttgcgttcctctgacggctcttatttggctggtcccgatgatatttat
gtctctccaagtcaaatcagacgttttggtcttcgatctggtgataccatctccggcaaa
atccgtcctcccaaagacagcgaacgttattttgcattattaaaagtagatcagatcaac
tacgatacgccagatagtgctaaacgtaagattttgttcgaaaacttaactcctttattt
gccgcagagcgtttggtgatggagcaaggtaatggtagtactgaagatttaaccgcccga
gttgttgatttatgtgctccttttggccgaggtcaacgtggcctgattgtttctccaccc
aaggctggtaagacattgatgttacaaaacatcgcacgttctatagaaaagaattatcca
gagtgctatctcattgttcttcttattgatgagcgtcctgaggaagtgactgagatgcaa
cgttctgttaagggcgaagtggttgctagtacttttgatgaaccagcgaatcgccatgtt
caagtcgccgaaatggtaattgaaaaagcaaaacggttagttgaacataagcgtgatgta
gtgattttgttggattctattactcgcttggctcgtgcatacaacactgtagttccttca
tcaggtaaagtacttactgggggagtggatgcaaatgccttacaaagacctaagcgttta
tatggtgctgcacggaatatagaagaaggcggtagcttgactatcattgctacagctttg
gttgatactggttctaaaatggacgaagtaatttacgaagagttcaagggaacaggtaat
atggaaatccacttgagccgtaatattgctgagcgtcgtgttttccctgcaattaatatt
aaccgctcaggtactcgtcgagaggatctcctgttaagtccagaagatttacagcgtact
tggatcctgcgtaagattcttcaatctatggatgaatgtgatgctattgaattcttatta
gagcgtatgaagaaccataagactaatgcggagttctttgacgcaatgaaacgtcaagag
taa
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