Laceyella sacchari: C1X05_01460
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Entry
C1X05_01460 CDS
T05304
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lfb
Laceyella sacchari
Pathway
lfb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C1X05_01460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfb03021
]
C1X05_01460
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_01460
Enzymes [BR:
lfb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C1X05_01460
Transcription machinery [BR:
lfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C1X05_01460
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C1X05_01460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
OPA3
Motif
Other DBs
NCBI-ProteinID:
AUS07658
LinkDB
All DBs
Position
276014..276958
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIEAVEISDDHRYGKFVVEPLERGYGTTLGNSLRRVLLSSLPGAAVTTIQIDG
VLHEFSTIPGVVEDTTEIILNIKQLALKIHSDEEKILEIDLEGPGEVKAGDIRADSDVEV
LNPDLHIATLAEDAHLRIRMTANRGRGYVSADKNKREDLPIGVIPIDSIYTPIERVNYQV
TNTRVGQVTNYDKLILEVWANGSLKPDEAVSLGAKILNEHLMLFVGLTEQAKDAEIMVEK
EEDKKEKVMEMTIEELDLSVRSYNCLKRAGINTVQELTQKSEEDMMKVRNLGRKSLEEVQ
EKLQELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaagatcgaagctgttgaaatcagtgatgatcatcgttac
ggaaaatttgtggtagaacccttggaacgcggatacggcactaccctgggcaattctctg
cgccgtgtcctgctctcctctttgccaggagcggccgttacaaccatccagattgatggg
gtattgcatgagttctccacgattcctggagttgtagaagataccacggagatcattctc
aacattaaacaacttgctctcaaaattcattcggatgaagagaaaatcctggagatcgat
ctcgaaggcccgggagaagtcaaagcgggggatattcgcgcggatagtgatgtagaggtg
ttgaatcctgatttgcacatcgctacattggctgaagacgcccacctgcgcattcggatg
accgcgaatcgtggccgcggatatgtatctgctgataagaataaacgtgaagatctgccg
atcggtgtgattccgattgactcgatctacacgcctattgaacgggttaactatcaagtg
accaatacgcgtgttggacaagttaccaactacgacaaattgatcttggaagtttgggcg
aatggtagcttgaaaccggatgaagcggtgagccttggcgctaagatcttaaatgagcac
ttgatgttattcgtgggtctgactgaacaggcaaaagatgctgaaatcatggtagaaaaa
gaagaagacaaaaaagagaaggtcatggagatgaccatcgaggaactcgacctctccgtg
cgttcttacaattgtctcaaacgtgccggcatcaacaccgttcaagagctcacgcaaaaa
tcagaagaagatatgatgaaagttcgcaacttgggacgcaaatctctggaagaagttcaa
gagaagttgcaagagctcgggttgtcacttcgcaaagacgactaa
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