Laceyella sacchari: C1X05_01545
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Entry
C1X05_01545 CDS
T05304
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lfb
Laceyella sacchari
Pathway
lfb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C1X05_01545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_01545
Enzymes [BR:
lfb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
C1X05_01545
DNA repair and recombination proteins [BR:
lfb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C1X05_01545
Prokaryotic type
C1X05_01545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Polysacc_deac_1
ARM_KNTC1_1st
Motif
Other DBs
NCBI-ProteinID:
AUS07673
LinkDB
All DBs
Position
289840..290514
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AA seq
224 aa
AA seq
DB search
MFTLTNDWATILQSEFEKPYYKELISFLEKEYEQETIYPPREDVFSALNLTSYQDTSVVI
LGQDPYHGAGQAHGLSFSVKPGVKQPPSLKNIFKELHDDVGCEIPNHGYLVKWAEQGVLM
LNTVLTVRESKPNSHKGKGWENFTDQVIKALNEREQPVVFLLWGRHAQEKKNLITNERHH
IIESAHPSPFAARKGFFGTKPFSKANQLLKEMGRKEIDWQIPAL
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtttacgcttaccaatgattgggccaccattttgcaatcggagtttgagaaaccgtac
tataaagaattgatttcctttttggaaaaagaatatgagcaagaaaccatttatcctcct
cgagaagatgtcttttcggcattgaatcttacatcataccaagacaccagtgttgtgata
ttgggacaagacccttaccatggggcgggacaggcgcacgggctgagcttttctgtcaag
ccgggagtgaaacaacccccctctcttaagaacattttcaaagagctacatgatgatgtg
gggtgcgaaatccctaaccatggttatctggtgaagtgggcggagcagggcgttctgatg
ttgaacacggtgctgacggtaagggagagcaaacccaattcccataagggtaaaggatgg
gagaactttaccgaccaggtgatcaaggcattaaacgaacgggagcaaccggttgtgttc
ctgttgtgggggcggcatgcgcaagagaaaaagaacttaatcacaaatgagcgccaccac
atcatcgagtcggctcatcccagcccctttgcggcaagaaaagggttttttggtacaaaa
cctttttcaaaagcaaatcagcttttaaaagaaatgggcagaaaagaaatcgattggcaa
attcctgcgctctaa
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