Laceyella sacchari: C1X05_01765
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Entry
C1X05_01765 CDS
T05304
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
lfb
Laceyella sacchari
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfb03021
]
C1X05_01765
Transcription machinery [BR:
lfb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C1X05_01765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GerE
HTH_23
Sigma70_ECF
HTH_3
DUF134
DUF1492
IF2_N
NirdL-like_HTH
KORA
TnsD
FAM92
HTH_37
HTH_16
UPF0122
Rad51
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
AUS07691
LinkDB
All DBs
Position
314644..315429
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AA seq
261 aa
AA seq
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MSSRPHPSLTDEQVYNLIARFQEDGDAEAQAILVAHYRDLVETLAFKFAHGSEPYEDLVQ
VGMIGLIASLKRFDPDYGRSFESFAVPTIVGEIKRHIRDKTWSVHVPRRIKELGPRIKAA
VEELTTQLQRSPRVQEIAEYLGVSEEEVLETMEMGRSYNAVSVDSPIEAANDGSQITLLD
LVGTEDGGYEQIDRKMLLDKIFAVLTEREQEILRLTFFENLSQKQVGDQLGISQMHVSRL
QRRALAKLRQAIRMEPSEVIG
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgtccacatccttcactaaccgatgaacaggtgtacaacctgatagcaaga
ttccaagaggatggggatgcagaggctcaagcgattttagtcgcgcattaccgtgatcta
gtggaaacattggcctttaagttcgcccatggatcagagccgtacgaagatctcgttcag
gtcggaatgatcgggctgatcgcttcattgaagcgctttgatcccgattatggccggagt
tttgaaagctttgccgtgccgacgatcgtgggtgaaatcaagcgccatatccgggacaag
acatggagtgtgcatgttccacggcgcatcaaggagttggggccgcgcatcaaggcggcg
gtcgaagaattgacgacacaattgcaacgttccccccgggtgcaggagattgcggagtat
ctcggcgtctcagaagaagaggtgttggagacgatggagatggggcggagttacaacgcc
gtttccgtcgatagcccgattgaagccgccaatgatggcagccaaatcaccctgctcgat
ctggtgggtacagaagatggcggatatgaacaaattgaccgcaagatgttgttggacaaa
atctttgctgtgctgactgaaagggaacaagagatcctgcgtctcaccttttttgagaat
ctcagccaaaaacaggtgggggatcaactgggaatttcccaaatgcatgtctcgcgcctg
caacgaagggcgttggcgaagttgcgacaagcgattcgcatggagccgtcggaagtgatt
ggataa
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