Laceyella sacchari: C1X05_03465
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Entry
C1X05_03465 CDS
T05304
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lfb
Laceyella sacchari
Pathway
lfb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C1X05_03465 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfb03019
]
C1X05_03465 (recQ)
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_03465 (recQ)
Enzymes [BR:
lfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1X05_03465 (recQ)
Messenger RNA biogenesis [BR:
lfb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C1X05_03465 (recQ)
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C1X05_03465 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AUS07976
LinkDB
All DBs
Position
complement(654569..656734)
Genome browser
AA seq
721 aa
AA seq
DB search
MLCKWVNRVSIEQAELLLQKFYGYATFRPGQRKIIQSILAGHNTMGIMPTGGGKSICYQI
PALMFPGITIVISPLISLMKDQVDGLKQLGISATYINSTLQPHEIDQRIEALRSGEVKLL
YIAPERLESERFQTIFETLPIYLVTIDEAHCISTWGHDFRPSYRSMAERLLTLPRRPLIA
ALTATATVDVRDDIANLLQISPKHIFSTKLERDNLSFYVHRDGQKREFITQYLRDHPGQT
GILYCSTRKEVDQLHRYLQEEGFPVAKYHAGMSDLERNRAQEAFSYDRIQTIIATNAFGM
GIDKSNVRFVIHYNLPRNLECYYQEAGRAGRDGDRSECILLFSPTDIQTQKYLIDHSEMT
PERKTLELSKLRCMVDYCFTDECYQQVFIRYFGNDHPYTCGTCGNCRKKLGEAEDRTIDA
QKIFSCIKRMNERFGFTVVSKVLRGSKNKRILSWGLDRLSTYGIMKDHTEKEIIQLCHQL
VSNHYLTLDLSHPSVPVAKLTPLAIEVLKGSRRVLLHREEIRTPMVEPSRGSLLFEELKA
LRKSISEREQLPPYIIFQDSTLKEMCRRLPITEQEMRAIPGVGELKYAKHGHAFLALIQK
YVDKHGRRRTASAPEQSEKEQSHLHTYRLFQEGKTIDEIAKLRQLTRGTIEEHLIRAGLD
GHPLDWDAFIPARWEALIMRKIDELGAHKLRPLKDALPDEVDYMAIKAAILKKELAELQT
Q
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtaagtgggtgaatcgagtgtcaatcgaacaagcggaactactcctgcaaaaa
ttttacggttacgctacattccgtccggggcaacgcaaaatcatccagagcatcttggcc
gggcataacacgatgggcattatgccgactggcgggggcaaatccatctgctaccaaatt
ccggcgttgatgtttccagggattaccatcgtgatttcccccttgatctccttgatgaag
gatcaagtggacggcttaaagcaactaggcatttccgccacatacatcaacagcacgcta
caaccccatgagatcgaccagcgcattgaagcgctccgatccggcgaagtcaaattgctc
tacatcgcacctgagcgcttggaatctgagcgcttccaaaccattttcgagacattgccc
atctatttggttaccattgacgaagcgcactgtatctcgacgtggggacatgactttcgc
cctagctaccgctccatggccgaacgcttgctgacattgccgcgcaggccattgatcgcc
gccttgaccgcgacagccacggtggatgtgcgcgacgatatcgccaatttgttgcaaatc
tcgccaaagcatattttctcgactaagctggaacgggacaatctttccttttatgtccac
cgcgacgggcaaaagcgtgaattcatcacgcaatatctgcgcgatcacccagggcagacc
ggcatcctatattgctccacccgtaaagaagtggatcagttgcatcgctatttgcaagaa
gaaggctttcctgtcgccaaatatcatgcaggcatgagcgatctggagcgcaatcgggcc
caagaagcgttttcctatgaccggattcaaaccatcatcgctactaacgcgtttggcatg
gggatcgacaaatccaatgtccgatttgtaatccattataatctgccccgcaacctggaa
tgttactatcaggaagcgggacgagctggcagggatggcgaccgaagcgagtgtatcctg
ctgttctcgccgacggatatccaaacgcaaaaatacctgatcgaccattccgagatgact
ccggagcgcaaaacgttggaacttagcaaattacggtgcatggtggattattgctttact
gatgagtgttaccagcaggtatttatccggtattttggcaatgatcatccctacacttgc
ggcacctgtggcaattgccgcaaaaagctgggcgaagcagaagaccgcaccattgatgcg
caaaaaatcttctcctgcatcaaacgcatgaatgaacgcttcggcttcaccgtggtgtcc
aaggtgttgcgcgggtccaaaaacaagcgcattctcagctgggggttggatcgcctctcc
acctatggcatcatgaaagaccacaccgaaaaagaaatcattcagctttgccaccagttg
gtgagcaaccattacctcaccctggacttgtcacaccccagcgtgcccgttgccaagctg
acgccactggcgattgaggtcttaaaaggttcccggcgcgtactgctccaccgcgaagaa
atacgcacgccgatggttgagcctagccgaggttctctgctgttcgaagaactgaaagca
ctcaggaaatcgatttccgagcgagaacaattgccgccatacatcattttccaagacagc
acgctcaaagagatgtgccgacgcttgccgatcaccgaacaggagatgcgagccatcccc
ggtgtgggtgagctgaaatacgccaaacacggtcatgcttttctagccttgattcaaaaa
tacgtggacaagcatgggcgcaggcgaacagcttccgctcccgaacagtcggaaaaagaa
cagagtcacctgcacacctaccgtttattccaagaagggaaaacgatcgatgagatcgcc
aaactgcggcaattgacgcggggaacgattgaagagcatctcatccgcgccggcctagac
ggccatccgctggattgggacgccttcatccctgcccgctgggaagcactgatcatgcgc
aaaatcgacgaattaggcgcgcacaaactccgtccgctcaaagacgcgttgccagacgag
gtagactacatggctatcaaagcagccatcttaaaaaaagagctggccgaactgcaaacg
cagtga
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