Laceyella sacchari: C1X05_10325
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Entry
C1X05_10325 CDS
T05304
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lfb
Laceyella sacchari
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfb03032
]
C1X05_10325
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_10325
Enzymes [BR:
lfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C1X05_10325
DNA replication proteins [BR:
lfb03032
]
Prokaryotic type
DNA Topoisomerases
C1X05_10325
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C1X05_10325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
RNA_POL_M_15KD
Toprim_4
Pput2613-deam
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AUS09180
LinkDB
All DBs
Position
complement(2084660..2086735)
Genome browser
AA seq
691 aa
AA seq
DB search
MADSLVIVESPAKAKTIKKYLGSKYIVKASMGHVRDLPKSQMGVDVEDKFTPKYITVRGK
GDVLKELRQAKKKVKRVYLAADPDREGEAIAWHLAHILDVPLDQECRVVFNEITKQAVKD
AFKQPRKINMDLVNAQQARRILDRLVGYGISPILWKKVKKGLSAGRVQSVAVKLIMDREL
EIRQFVPEEYWTVTAVLASGEDEVEAKFHGYHNKKTELKSAEDVDKLLADIKGKRFIVEE
IKTSERKRNPAPSFITSTLQQEAARKLNFRAQKTMAVAQQLYEGIDLGKEGTVGLITYMR
TDSTRISETAQAEAKAYIEQTYGKEYLPTSPRTHKKKAGAQDAHEAIRPTSVLRKPADIK
EYLSRDQFRLYQLIWERFVASQMATAVFDSVTADIRAGDALFRASGSKLKFAGFMKVYVE
GNDENKKEEDKLLPPLSEGQTLKRKSIDPKQHFTQPPPRYSEASLVKELEEKGIGRPSTY
APTLDTIQKRGYVFLKEKRFVPSELGEIVIQLIGEFFPEILDVKFTANMEDDLDQVEEGK
ADWIQILDHFYQPFQKRLQTAEKEMAEVELEDEVSDEVCEKCGSPMVYKFGRFGKFLACS
AFPECRNTKAIVKSTGVTCPECKQGEVVERKSKKQRTFYGCNRYPDCEFVSWDAPVARPC
PKCKGMMVEKKGKKGTVIRCTSCDYNEETKD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgctggttattgtcgaatcgcccgcgaaagccaaaaccattaaaaaatac
ttagggagcaaatacattgtcaaggcttcgatggggcatgtgcgcgacttgccaaagagc
caaatgggagtcgatgtggaagataaattcacacccaagtacattaccgttcggggaaaa
ggagatgtcttgaaagagttgcgccaggccaaaaagaaagtgaagcgcgtgtatctggcc
gccgaccccgaccgcgaaggggaagcgattgcctggcatttggcgcatattctcgacgtg
ccactcgatcaggaatgccgcgtggtgtttaacgaaattactaaacaagcggtgaaggac
gctttcaaacagccgcgaaagatcaacatggatttagtgaatgcgcaacaggcgcggcgc
atcttggatcggctcgttggctacgggatcagcccgattttgtggaaaaaggtaaaaaaa
gggttgagcgcggggcgcgtgcaatccgttgcggtcaagttaatcatggatcgcgagttg
gagattcggcaattcgtccctgaagaatattggacggttaccgccgtcttggctagtggc
gaagatgaggtggaagcgaaattccacggttaccacaataagaaaacagaattgaagagt
gcggaagatgtagataaactgcttgctgacatcaaagggaagcgctttatcgtcgaggaa
atcaagacgagcgaacgcaaacgcaatcccgctccctcgtttatcaccagcacgttgcaa
caggaagcggcgcgcaaattgaacttccgcgcccaaaaaacgatggccgtcgcacagcag
ttgtatgaagggatcgatctcggcaaagagggaacggtcgggttgatcacttatatgcgt
accgactctacccgcatctcagagacggcccaggctgaagcgaaagcctacatcgaacag
acttacggcaaagaatacttacccacgtccccccgcacgcacaagaaaaaagcaggtgcg
caagacgctcatgaagcgatccgcccgacatccgtcctgcgaaagccagcggatattaaa
gagtatttgtcgcgggatcagtttcgcctgtaccaactgatctgggagcggtttgtcgct
tcacagatggcaacggcggttttcgattcggttacggccgatatccgcgcgggggacgct
ttgttccgggcctcggggtcgaagctgaagtttgccggatttatgaaagtgtatgtggag
ggcaatgacgaaaataaaaaggaagaagataagttgttgccgccgctctctgaggggcaa
accctcaaacggaaaagcatcgaccccaaacagcactttacccagccgcctccgcgctat
tccgaggcgagcttggtgaaagagctggaagaaaaaggcatcgggcgccctagcacctat
gcgcccacgttggacacaatccagaagcgtggatatgtatttttgaaagagaaacggttt
gtcccctctgagctgggggagattgtgatccaattgataggagaattcttcccggagatt
ttggatgtgaaattcacggcgaacatggaagatgacttggatcaagtggaagaaggcaaa
gcggattggattcaaatccttgaccacttttaccagccgtttcaaaaacggttgcagacg
gctgaaaaagagatggcggaagtagaactggaagatgaagtttccgatgaagtttgtgag
aaatgcggcagtccgatggtgtacaaatttggccgcttcggcaagtttctggcttgctcc
gcgtttccggaatgccgcaataccaaagccatcgtcaagtcgaccggagtgacgtgccca
gaatgcaagcaaggtgaagtggtcgaacgcaaaagcaaaaagcaacgaaccttttatggt
tgcaaccgataccccgactgtgaattcgtttcatgggatgctccagtcgcgcgtccttgc
cccaagtgcaaagggatgatggtggagaaaaaagggaaaaagggaacggtgattcgttgc
acctcatgtgactacaacgaagaaacgaaggactaa
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