Laceyella sacchari: C1X05_14415
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Entry
C1X05_14415 CDS
T05304
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfb
Laceyella sacchari
Pathway
lfb03420
Nucleotide excision repair
lfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C1X05_14415
03430 Mismatch repair
C1X05_14415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_14415
Enzymes [BR:
lfb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C1X05_14415
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C1X05_14415
MMR (mismatch excision repair)
Other MMR factors
C1X05_14415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_30
SLFN-g3_helicase
PhoH
AAA_11
DEAD
NACHT
ResIII
nSTAND3
EccE
AAA_18
Motif
Other DBs
NCBI-ProteinID:
AUS10513
LinkDB
All DBs
Position
complement(2925550..2927625)
Genome browser
AA seq
691 aa
AA seq
DB search
MLEKIEKQLVELEGIPRYRGKDLVEQALDNQRQNRLKQLRIARNEPYFGRLDFAEDGKDE
PTPLYIGKVGVQDDKENAPLVIDWRAPVASLFYSFTGETDRAEYTSPEGVIEGTVYLKRN
IAIRKQQIQRVVDSYVRGEKSSGMVDEFLLYRLGEKKDNRLRDIVSTIQHEQDQIIRAER
NIPLVIQGVPGSGKTTVALHRLAYLLYQYQEQLRAERFVIFAPNRMFVDYISDVLPELGV
GDVQQFTFVDWAYDFFDDELPPVEKEWADEFAMGGTVDQADLAWFRYKGSLAFHDRIAAS
LTELEATFVPEKPFSPWEGKVLPAEEIRRWFAEEYRHYPLLKRKERVFARLKRWLEMELK
ELRDIDPRGKIRKQANQRLRTYMKAWPQPTPWSWYLRLISTKSAEFDVAPPAAFVQKLKR
KRIGVTDLAPLLHIHVALHGISNENTFDHVVIDEAQDVSPYQLAVLQRFCQSNSFTILGD
LLQNIHVHKGITEWRELMDLFAKGTCRYVQLNKSYRSTMEIIQFANEIVRDYAKGVAVAT
PVYRSGDPVRMLSVSAAERNVLLAREVQALIERGVGTVAVVTRTEAESERIAAELRDQGV
EAHLITSTQAEYHGGISVIPIYLTKGMEFDAVILVEVDEGRYPVDELHAKLLFVGCTRAL
HHLVMMSSERPSPLLEKAARYGLGELGGEEV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaaaaatcgaaaagcagctggtcgagttggaggggattccgcgttaccgaggc
aaggacttggtggaacaggcgctcgacaatcaacggcaaaatcggttaaaacaattgcgt
atcgcccgaaatgagccttattttggaagattagattttgcagaggacggaaaagacgag
ccgacaccgctctatatcggcaaagtcggcgtgcaggatgacaaggagaacgcgccgctg
gtcattgattggcgggctcctgtcgccagtctattttattcatttacaggagagacggac
cgcgctgagtacacctcccctgaaggagtgattgaggggacggtgtatttgaagcgaaat
atcgcgattcgcaagcaacagattcagcgggtggttgacagttatgtgcgcggggaaaag
tcatccgggatggtggatgaatttttgctttaccgtttgggtgaaaagaaagacaatcgc
ttaagggatatcgtgtccacgatccagcatgaacaagaccaaatcatccgcgccgaacgc
aacatcccgctcgtaatccaaggggtgccggggagtggtaaaaccacggtcgctttgcac
cgcttggcttatttgctgtaccagtatcaagaacagctacgggcggaacggtttgtcatc
tttgctcccaaccgcatgtttgtcgattatatctcggacgtgttgcctgaattgggcgtg
ggcgatgtgcagcaattcacctttgtcgattgggcctatgacttttttgacgacgagctg
ccgcctgtggaaaaggaatgggcggatgaattcgcgatggggggtaccgtcgatcaagcg
gatttggcctggttccgatataaaggaagccttgcgtttcatgatcggatcgcggcgtct
ttgacggagctggaagcgacgtttgtgccggaaaagccgttttcgccttgggaaggcaag
gtgttgccagcggaggagatccggcgttggtttgcggaagagtatcggcattatcctctc
ctgaagcggaaagaacgcgtatttgcgagattgaagcgctggttggagatggagttgaaa
gagttgcgtgatatcgatccgcgggggaagattcgcaaacaagccaaccagcggttgcgc
acctatatgaaggcatggcctcaaccgactccttggtcatggtatctgcgcctaatcagc
acgaagtcagccgaattcgatgttgcgccacccgcggcgtttgtccaaaagttgaaacga
aagcggatcggcgttaccgatttggctcctttgctgcacatccatgttgcgttgcacggg
atttctaacgaaaatacgtttgatcatgtggtgatcgatgaggcgcaagatgtatctcct
tatcagctggcggtgttgcaacggttttgccaaagcaactctttcaccatattgggcgat
ctgttacaaaacatccatgtccataaagggattactgagtggcgcgaattgatggactta
tttgcaaaaggcacgtgccggtatgtgcaattaaacaagagctatcgttcaaccatggaa
atcattcagtttgccaatgagattgtccgggattatgccaaaggtgtggcagtggctact
cctgtttatcgaagtggggacccggtgcggatgttgtccgtgtcggcggcggagcggaat
gtgttgttggctcgggaagtgcaggccttgatcgagcgaggggttggcaccgtggccgtg
gtgacgcggacagaagcggagagtgagagaatagcggccgagttgcgcgaccaaggggtg
gaggcgcatctgatcacttctacacaggctgaatatcacgggggcatttcggtgatccct
atttatttgaccaagggaatggagtttgacgccgtcattttggtggaagtggatgagggg
cgctatcctgtagatgagctccatgctaaactgttgttcgtaggttgcacccgggctttg
catcatttggtgatgatgtcttctgagcgcccttctccgctattggaaaaagcggcgcgg
tatgggctgggtgaattgggcggtgaggaagtgtaa
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