Laceyella sacchari: C1X05_16405
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Entry
C1X05_16405 CDS
T05304
Name
(GenBank) hypothetical protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
lfb
Laceyella sacchari
Pathway
lfb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
C1X05_16405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfb03400
]
C1X05_16405
DNA repair and recombination proteins [BR:
lfb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
C1X05_16405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
DUF4715
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AUS10258
LinkDB
All DBs
Position
complement(3315461..3317140)
Genome browser
AA seq
559 aa
AA seq
DB search
MYGVIPWRKEGIVIHWDETTWAELDVAYCWNLWQPLTPMGKRAKRRVRPFRPGEEREWEQ
VLREQDEINLWLAAHPRCQALVSHCLKKMPDIEGQLDKLGADEVLGLTDWFHMKQFLWQF
GQLHHLMREHRCTVVSLMPEEDVPLVEQCLARLNPGTNRTAAFWIDDAYDDDLRRLRQQW
CRMEIKERERVEQCKREIEEAYGIRRNRLGTWTVPRHTPLEEALRQDRRVVCEAETAYDV
TFRLPEVADQEMARLQEQVEAREQAVCVQLTEEFRRVYPRLRYWMQQVTHFDLQWSRYHA
GQKWAGVRPEWDGDRVLLEGAIHPGIAQDVAAEGRSVTPIDLEVGRGVTVITGPNMGGKT
VALKTVGLIAVLAHYGLFVPATACRLPLMHWIASTLGDGQSTKQGLSRFGAEVVRLTEWL
NQPGEGLLLLDEIGRGTNPREGAALAQAITSRLSEGNDWAVHVTHYHEVNQLPGIRRYRV
AGLSWPDLEREGLGSEGAWRERLHRHMDYRLIPVQREEALDADALRLALLLGLPEEIVAD
AERRLGSGEDEGKTAAESG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtatggcgtgatcccttggaggaaggaggggatcgtgatccattgggatgaaacgaca
tgggcggagttggatgtggcgtattgttggaacttgtggcagcctctcacgccgatgggt
aagcgggccaaacggcgggtgcgtccttttcgtccgggtgaagagcgcgagtgggaacaa
gtgcttcgtgaacaggatgaaatcaacttgtggctagcggcccatccccgttgccaagca
ctggtctcgcattgcttgaagaagatgccggacatcgaagggcaactggacaaattgggt
gcggatgaggtgttggggctgactgattggttccacatgaaacaatttttgtggcaattc
ggccaactacaccacctcatgcgggagcatcggtgtacagtcgtttccctgatgccggag
gaagatgttccgcttgtggaacagtgcttggcgcgactcaatccgggtactaatcggaca
gccgctttttggattgatgatgcgtatgatgatgatttgcgccgcttgcggcaacaatgg
tgccgtatggaaatcaaggagcgagagcgtgtggaacaatgcaagcgggagatcgaggaa
gcgtatggtatccgccggaaccgtttgggaacttggacggttccgcgccacacgccttta
gaagaagcgttgcgccaggaccggcgggtcgtgtgcgaggcagaaacggcatatgatgtc
acgtttcgcttgccagaagtcgctgatcaagagatggcgaggttgcaagagcaagtggaa
gcgcgggaacaggcggtatgcgtccagttgaccgaagaatttaggcgcgtgtatccccgt
ttgcggtactggatgcaacaggtgacgcacttcgatttgcaatggtcccgctatcatgct
ggacagaagtgggccggtgtgcgaccggagtgggatggagaccgggttctccttgaggga
gccatccatccgggcatcgcgcaagacgtggccgcggaagggagaagcgtgacgccgatt
gatctggaagtgggccgtggtgtcacggtaatcactggccccaacatgggaggcaagacc
gtcgccttaaaaacggtagggctgattgccgtcttagctcattatggattgtttgtgccc
gccaccgcttgccggctgcccttgatgcactggattgcgagcacgctgggcgacgggcag
tccacaaagcaaggcttaagccgctttggggcggaagtggtgcgtttgacagagtggctg
aaccaaccgggagagggattgcttttgttggatgagatcggcaggggaaccaatccgcgg
gaaggagcggccttagcgcaagcgatcacaagccggttgagcgaagggaatgattgggcc
gtgcatgtgacgcattatcatgaggtgaatcagttgcccggcatccgccgttaccgagtg
gccggcttgtcatggccggatttagaacgagaaggtctggggagtgaaggggcgtggcgg
gagcggttgcaccgccatatggattatcgactcattccggtgcaacgggaggaagcgctt
gatgccgacgctctccgcttggccctgctcttagggttgccggaagagattgtggcggat
gcggaacgacgattggggagtggggaagatgaagggaaaactgcggctgaatcaggctga
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