Leptospirillum ferrooxidans: LFE_0004
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Entry
LFE_0004 CDS
T01809
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lfc
Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfc03032
]
LFE_0004
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_0004
Enzymes [BR:
lfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LFE_0004
DNA replication proteins [BR:
lfc03032
]
Prokaryotic type
DNA Topoisomerases
LFE_0004
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LFE_0004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
BAM05735
UniProt:
I0IKD6
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Position
5158..7626
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AA seq
822 aa
AA seq
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MAMIPFEQAIAIDTEIRTAYLNYSMSVIVGRALPDIRDGLKPVQRRVLFAMHEMGVRSGG
AYKKSARIVGDVIGKYHPHGDTAVYDTAVRLVQPFTLRYPLIDGQGNFGSIDGDSPAAMR
YTEIRLKAISEEMMSELSEETVGFGPNYDESLEEPKVLPAKLPLLLLNGSSGIAVGMATN
IPPHNSREIINALLEMIDNPSFSMEDLLRVVTGPDFPTGGLIMGRSGIEEAFRTGRGSVV
MRGVVDVEESTRADRQAIVISEIPYMVNKTRLIEKIAALVRDKEIDGIADIRDESNREGM
RIVLDLKRDGNPQVIINRLYSMTALQSSFGVNFVAIVNQRPVTLSLLEALRHFLDFRQDV
VTKRTLYRLKKARERFHILEGLKRAIDLMDQIIALIRASDSPETAREGLMTSYAFSEIQA
RAILDMRLQRLTALERDKIEAEYEEVRKIILELERILGSRDVLMGVVREEFLELREKFGD
ERRTRIVPDEGEIDFESLIPDDPCYINLTFQGYIKRLSKDAYPTQNRGGKGRIGVTLKDD
DAVISTLSPTMHETILFFTDIGKVYRLKVHEIPEGQRATRGKSIRSLLALAPDEKVTQLL
SIRSFGEEKSLIFVTERGKIKRTQLIHYGQIRQSGIIAISLEEGDRLAQVMVGEPGTDIL
IATKGGKGILIPMDDPDKGFRSMGRTASGVKGIKLAPNDLVVGAETIQDEDFVAVITARG
YGKRVNTGKDFRLQGRGGQGVRILKAAEKIGPVVSVIKVTGSEDVFLITQKGQALRIETS
TIRLTGRTAQGVKLLNLQSEDEIQCASLAPLRGETEDGTPAT
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ttggccatgattccttttgagcaggcgattgcgattgataccgaaatccggaccgcatac
ctgaactattccatgagcgttattgtcggcagggccttgcccgatattcgggacggcctg
aagcccgttcagagacgggttctttttgcgatgcatgaaatgggagtccgttccgggggg
gcttacaaaaaatcggcccgtatcgttggtgatgtgattggtaaataccatcctcacgga
gatacggcggtttatgatacagcggtcaggcttgtccagccatttacgcttcgttaccca
ttgattgacggccagggaaattttggatcgatcgacggagattctcccgcagccatgagg
tatacggaaattcggctgaaggcgatttccgaggagatgatgtcggagctttcggaagaa
acggtcgggttcggtccaaactatgatgaatctcttgaagaacctaaagtccttcccgca
aaacttccccttttgcttctgaacggatcgtcgggtattgccgtcggaatggcgaccaac
attcccccccacaacagtcgggagatcatcaacgccctgcttgagatgatcgataacccg
tctttttccatggaagatcttctccgtgtcgtgaccggaccggattttccgacaggtggc
ctgatcatgggtcgttcgggtatagaggaggccttccgcaccggtcgcggttctgtggtg
atgcggggagtggttgatgtggaggagagtaccagggccgaccgtcaggcgatcgtgatc
agcgaaattccatacatggtgaataaaacccgtctcattgaaaaaatcgcggctcttgtc
cgtgacaaggaaattgacggaattgccgatattcgggacgagtcaaatcgggaaggaatg
cggatcgtccttgatctgaaacgggacggaaatcctcaggtcatcatcaacaggctttat
tccatgaccgctcttcaaagttcgttcggggtcaattttgtcgccatcgtcaaccagcgg
ccggtcaccctttcccttttggaagcacttcggcattttctggatttccgtcaggatgtg
gtcaccaagagaaccctctaccgcctcaaaaaagcccgggaaaggttccatatcctcgag
gggttgaagcgtgccatcgatctgatggatcagatcattgcgctgattcgggcgtcagac
tctcccgagaccgcacgggaagggcttatgacctcctacgctttttccgagattcaggcc
cgtgccattctcgatatgcgtctgcagcggctgactgcccttgagagggataaaattgaa
gcagagtatgaagaggtccggaaaattattcttgagctcgaaaggatccttggcagccgg
gatgttttgatgggagtcgtgagagaagagtttttggagcttcgtgaaaagttcggggat
gaaaggcggaccagaattgttccggatgaaggcgagattgatttcgaatccctcattccc
gacgatccctgttatatcaacctgacattccagggatacatcaagaggctttcaaaagac
gcctatccgacccagaacaggggaggaaagggacgaatcggcgtcacactcaaggatgac
gacgccgttatttcgacactgtctcccacaatgcatgagactattctcttcttcaccgat
atcgggaaggtttatcgtcttaaggttcacgaaattccggaaggtcagcgggcaacccgg
ggaaagagcatccggtcgctcctggcgcttgctcccgatgaaaaagtcacacaacttctt
tccatccgctctttcggggaagaaaagagtctgatctttgtgaccgaaaggggaaaaatc
aagaggactcagctgatccattacggccagatccggcaaagcggaatcatagcgatttca
ttggaggagggggaccgtctcgcccaggtgatggtcggcgagccggggaccgatatcctg
atcgctacaaagggtggcaagggaattctgatcccgatggatgatccagacaagggtttt
cgcagcatgggtcgaacggcttcgggtgtgaaggggatcaagttggcaccgaatgacctg
gttgtcggagcggagacgattcaggacgaagactttgttgccgtcattacggcaaggggt
tacggaaaacgcgtcaatacaggaaaggatttccggcttcagggtcgcggaggccagggc
gtcaggatcctcaaggcagctgagaagattggtccggttgtttcggtcatcaaggtgaca
ggatccgaggatgtttttctgatcacccagaaaggccaggcgctcaggattgaaacatcg
acgatccgtttgaccggcaggacggcgcagggagtgaaacttttgaaccttcagtcggaa
gatgaaatccagtgtgcatccctggcacccctcaggggagaaacggaagatgggactccc
gcgacttga
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