Leptospirillum ferrooxidans: LFE_0225
Help
Entry
LFE_0225 CDS
T01809
Name
(GenBank) putative DNA polymerase III, gamma/tau subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc03030
DNA replication
lfc03430
Mismatch repair
lfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LFE_0225
03430 Mismatch repair
LFE_0225
03440 Homologous recombination
LFE_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfc03032
]
LFE_0225
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_0225
Enzymes [BR:
lfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LFE_0225
DNA replication proteins [BR:
lfc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LFE_0225
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LFE_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_22
AAA_16
AAA_30
TIP49
PIF1
RCF1-5-like_lid
Rad17
AAA_14
TsaE
AAA_19
Zeta_toxin
AAA_18
Sigma54_activat
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BAM05948
UniProt:
I0IKZ9
LinkDB
All DBs
Position
complement(218362..219993)
Genome browser
AA seq
543 aa
AA seq
DB search
MSTVISLARKWRPQTFSDLVGQESVFKAITFALKAKNLPQAYLFSGDRGVGKTTVARLLA
KSINCKDGPTTAPCLSCSSCLEIAKGSSPDVMEIDGASNTSVDDVRSLREGIHFLPFSGR
ARIYIIDEVHMLSTAAFNALLKTLEEPPSHVIFIFATTEAHKVPDTIQSRCQHFRFRNLT
IPEIKNQLQKICLAEGLDFSPEVLNLLSQAAEGSLRDALSLTDQIRALSQGGISLEDISL
FLGMTPAHLERDLLDSLLSGKLPDTLKIAENLLSIGIDPRNQLKNLSKRTRDLLMSSVLA
SPLTGKPFEWMQEAIPPSFLTRTPSEIFLEQMLTLLLRGEEELRKSPQPSITFLLILCRI
CHLKDAEPLAQILASLRNSVPDNSKRETIPSKPISPEEKGMDGNQKKNPDIQPEQKPSHL
DIRIPGDWKRFLREIKGLEPHDRELLEECQIQRTDPKTITLFVSKAFFESRVREHIPLLR
ESFLQREGEAVTILTKVQSQTGGPKIQSPVEQAKDHHLVKEAQNIFGAEIISVKNQSSPK
KDP
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactgtcatctccctcgcccgaaaatggcgcccccaaaccttttctgaccttgtt
ggacaggaatcggttttcaaggcgatcacttttgcattgaaagccaaaaaccttccgcaa
gcctatcttttttccggagacaggggagtcggaaaaacaacagtagcaagacttctcgca
aaatccatcaactgcaaggatggtccaacaacagctccctgcctttcatgctcctcctgt
cttgaaatcgcaaagggttcttcacctgatgtgatggaaatcgatggcgcttccaatacc
agtgttgacgatgtacgttccctcagggaagggatccattttcttcccttttcgggaagg
gccaggatctacatcatcgatgaagtccatatgctttcgactgcagctttcaatgccctt
ctgaaaacattggaagagcccccgtcccatgtcatctttatctttgccaccaccgaagcc
cacaaggttcctgacaccatccagtccaggtgtcagcatttcagattcaggaatctcacc
atacccgaaatcaaaaatcagcttcagaaaatatgcctggccgaaggactcgacttttct
ccggaagtcctgaacctcctttcgcaagcagcagaaggcagcctgagggatgcactgagt
ctcacagaccagattcgggccctttcccagggcggaatatcccttgaggatatttccctg
tttttgggcatgaccccagcccatctggaaagagatttgctggactcactcctttcagga
aaacttccggacacactcaagatcgcggaaaacctgctctcaatcgggattgaccccaga
aatcaattaaaaaatctttctaagcgcacaagagaccttctgatgtcatctgtcctggcg
agccccttgacgggaaaaccgttcgaatggatgcaggaagccattcccccgtcctttctc
acaagaaccccctcggagatcttccttgaacagatgctgacgctccttttaagaggagag
gaagagctgagaaaatctccccagccttcgatcacctttcttctgatcctttgccgtatc
tgccatctcaaggatgcagaaccgcttgcacaaattcttgcatccctcaggaactccgtt
ccggacaacagcaaaagagaaaccattccatcaaaaccaatttctcctgaagagaaaggg
atggacgggaaccagaaaaagaatcccgacatccaacctgaacaaaagccatcccacctc
gatatcaggattccgggagactggaaaagatttctgagggaaatcaaggggctcgaacct
catgaccgagaactccttgaggagtgccagatccagagaacagatcccaaaacaatcaca
ctgttcgtctcaaaggcattctttgaaagcagggtccgggaacacatcccgctcctcagg
gaatccttcctccagcgcgagggggaggccgttaccatcctgacaaaagtgcaatcgcaa
acgggtggccccaaaatccagtcacctgtcgaacaggcaaaagatcatcaccttgtcaag
gaagcccaaaatatttttggagcagagatcatatcggttaaaaaccagagcagtcctaaa
aaagacccataa
DBGET
integrated database retrieval system
