Leptospirillum ferrooxidans: LFE_0386
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Entry
LFE_0386 CDS
T01809
Name
(GenBank) putative crossover junction endodeoxyribonuclease
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LFE_0386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_0386
Enzymes [BR:
lfc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
LFE_0386
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LFE_0386
RecFOR pathway proteins
LFE_0386
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
BAM06107
UniProt:
I0ILF8
LinkDB
All DBs
Position
complement(379098..379622)
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AA seq
174 aa
AA seq
DB search
MGGPNLPTVQRGSSFTVLGVDPGLAATGYAVLSGTSLETVRILAQGTIRTSPKTPVEGRI
GEIYDRLEQIAKTHRPNAVIIEDHFNRKNAPNAGLMLGPVIGVVALLSNKLHLAFTTISP
RELKHRITGYGGASKEAVQESLAIWLGPRLHLSSTHEGDAMGLAFLGFSRLLPP
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
gtggggggaccgaatctccccacggttcaaaggggctcttcctttaccgtactgggtgtt
gatcccggacttgccgcaacaggctatgcggttctatccggaacatctctcgagacagtt
cgcatattggcccaaggaacgatcaggacatctccgaaaacacccgtcgagggaaggatc
ggcgagatttatgaccggcttgaacaaatcgcaaagacccaccggcccaatgccgtgatc
attgaagatcatttcaacaggaaaaatgcacctaacgccggtttgatgctgggaccggtc
atcggtgtcgttgctcttctgtcgaacaaactgcacctcgcttttacgaccatatctcca
agagagctcaagcacaggatcacgggttatggtggcgcctccaaagaggccgtccaggag
tcccttgccatatggcttggcccgagacttcatctttcaagcactcatgaaggcgatgcc
atgggattggcttttctcggtttcagcaggttattgcccccatga
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