Leptospirillum ferrooxidans: LFE_0595
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Entry
LFE_0595 CDS
T01809
Name
(GenBank) hypothetical protein
KO
K03092
RNA polymerase sigma-54 factor
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc02020
Two-component system
lfc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LFE_0595
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LFE_0595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfc03021
]
LFE_0595
Transcription machinery [BR:
lfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LFE_0595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
GIY-YIG
GIY_YIG_2
Motif
Other DBs
NCBI-ProteinID:
BAM06311
UniProt:
I0IM12
LinkDB
All DBs
Position
575636..576799
Genome browser
AA seq
387 aa
AA seq
DB search
MIPICKEKLDPALLGKIVVARFLELPLQRFDLFVQRLESELLTQRLSGVITIREIEGTKM
GQNVDPEGKTIGEIGWEGNTPELLYHKKSYIRTYHFDDTDQEGILQKKEFQKMVQSFRLI
NTRNHLTYALIQYMLRYQATYLRASDPTLLRPLTQSQISFGLATGGFYSGIADSSRISRL
IRTLFVKMPDNRIRDLSILSPSSREICCHFINRVIKLERSLMDEGKLLDPLTDGEIAERV
GADFGSHLSRRTVAYIRRELGIPEGKERRQVRCYHVATAHFSPPMFLSTPILREVVPNEP
GVYEIRSFVPGSHEGVIYIGSTRDLRKRLHHHLQGTGNNQRLREKIVRGARFRFRIVREH
WRDEEREIYRTFCVTYGTPPECNRMSP
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgattcccatatgtaaagaaaaacttgatccagctcttctcggaaaaatcgttgtggcg
agatttttggaactccctcttcaacgtttcgacctgtttgtgcaacgcctcgagtcggaa
ctattaacccagagactctccggagttatcacgattcgagaaattgaaggcacaaaaatg
ggccagaatgttgatccggagggaaagacgatcggagagattggatgggaaggaaatact
ccagaacttctatatcataaaaagagttatattaggacatatcacttcgatgataccgat
caagaagggattctccagaaaaaagaattccaaaaaatggttcagagtttccggctcatc
aataccagaaatcatttgacctatgctttgatccaatacatgctccgttatcaggcgacg
tatcttcgagcctccgacccaacgcttctccgcccattgacccagagccagatttccttt
ggtctggcaactggcgggttttattcgggcattgccgactctagccgtatatcccgtctc
attaggactcttttcgtaaaaatgccggataaccggatccgtgacctttcgattctttcc
ccgagttctcgtgaaatttgttgtcattttatcaatagagtgataaaacttgaaagatca
ttgatggatgaaggaaaacttttggatccactcacggatggggagatcgctgaacgggta
ggtgcagacttcggatcccatttgtcgagaagaacggtcgcttacattcgccgtgaactc
ggtatccctgagggaaaggagcgacggcaggtaaggtgttaccatgtggcgacggcacac
ttttctccaccgatgtttctttccacaccaattttgagagaggttgttccaaacgaacca
ggagtgtatgaaatccgctcgtttgttccggggtctcatgaaggtgttatctacatcggc
tctactagggatctcaggaaaaggttgcatcaccatcttcaaggaaccggaaataaccag
cgacttcgggaaaaaatcgtcagaggtgccaggttccgcttccggattgtcagagaacac
tggcgggatgaggagcgagagatttaccggacattctgcgtcacatacggaacgcctccc
gagtgcaaccgcatgagtccgtga
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