Leptospirillum ferrooxidans: LFE_0728
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Entry
LFE_0728 CDS
T01809
Name
(GenBank) putative transcriptional regulator, NifA, Fis Family
KO
K02584
Nif-specific regulatory protein
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LFE_0728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lfc03000
]
LFE_0728
Transcription factors [BR:
lfc03000
]
Prokaryotic type
Helix-turn-helix
Other families
LFE_0728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
GAF_2
AAA_5
AAA_16
Mg_chelatase
AAA
GAF_3
AAA_2
AAA_3
HTH_50
bpMoxR
CbiX
AAA_7
TIP49
nSTAND3
NYN
DUF815
Parvo_NS1
MCM
Motif
Other DBs
NCBI-ProteinID:
BAM06443
UniProt:
I0IME4
LinkDB
All DBs
Position
705996..707618
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AA seq
540 aa
AA seq
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MESEHQIIQELTTLFSISQELASCPDLDVALVKILGILDQNLGLHRSSILLLKGESDELS
TEIAHGLSEEEKERGRFKKGEGITGMVLESGEPVIVPDISLEPRFLNRTGSRLSKKEKTA
FIAVPLIFQGRKLGVLSADRSASGGKESLEEDVRLLTTISSIMAQAVLLRHNFDDEKRRL
QDETSRLEHALKHRYTISGWIGRSKLVAQIAESVHQVAASRATVLILGESGTGKEVIAKA
IHFNSPRNKMPFIQINCAAIPETLLESELFGHEKGAFTGASLSRPGRFEAANEGTIFLDE
IGEIPPSVQVKLLRVLQERVVERIGSNRPIPIDVRIVAATNRNLDQEVRMNRFREDLYYR
LNVIPIYLPPLRHRKEDIPLLLEHFRSRFIEENGRDVRIASDAIDVFMEYDWPGNVRELE
NIVERLVVMARKDIITADDVVQTLALFPVHSSGVPSVESSGNISTPTTTGREPAAPSRGA
SVHEINTDLPDTIREIERERIIKALERSGGVKTRAALALGITTRQLVYRMEKYGIRGEGI
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgaacaccaaattatccaagagctaacgaccttgttttccatcagtcaggag
cttgcaagttgtcctgatctggatgttgcccttgtcaaaattcttggcatcctggaccaa
aaccttggacttcacaggagctcgattctccttttgaaaggggagtctgatgagctgtca
acagagattgctcacggactttctgaagaagagaaggaaaggggtcgttttaaaaaaggg
gaaggtattactggaatggttcttgaaagtggggagccggtcattgttccagatatctcg
cttgaaccccggtttttaaacagaactggttcaagactatcaaaaaaggaaaagacagcc
tttattgctgttcctctgatctttcaggggagaaagcttggtgtcctttctgcagataga
agtgcttcgggtggaaaagaaagtctggaggaggatgtccgcttattgaccacaataagc
tccatcatggctcaggcggttcttttgagacataattttgatgatgaaaaacgacggttg
caagatgaaaccagcaggctcgaacatgccttgaaacatagatatacgatttcaggctgg
attggccgatctaagcttgttgcccaaattgccgagagtgttcatcaagtggcagcaagc
agggcaactgtcttgatccttggagaaagtggaaccggtaaggaggtaattgcaaaagcg
attcacttcaatagtcccagaaacaaaatgccatttattcaaatcaactgtgctgcaatt
ccggaaactcttcttgaaagcgaattgtttggacatgagaaaggggcttttactggggcg
agcctgtcgagacctggaaggtttgaggctgcgaatgaaggaacgatatttcttgatgaa
atcggggagatcccaccgtccgtccaggtaaagcttttgagagttctccaggaacgtgtt
gttgaaagaattgggtccaatagacctatccctattgatgtccggatcgttgcggcaacg
aaccgcaatctggaccaggaagtcaggatgaaccggttcagggaagatctatactatcgt
ctgaatgtcattcccatctatcttcctccattaagacatcggaaggaagatattcccctg
ttgcttgagcacttccgatccagattcattgaggagaatggaagggatgtccggattgct
tctgatgcgattgacgtgtttatggaatatgattggccaggaaatgtacgtgagcttgaa
aacattgttgagaggctcgttgtcatggccagaaaagacattataacggcggatgatgtg
gtccagactcttgctctttttccggttcattcgagtggtgttccatcggttgagtcgagt
ggtaatatttctaccccaacgacaacggggcgggaaccggctgctccatcaaggggagcc
agtgtccatgaaatcaacacagatctgccggatacgattcgggagattgagcgggagcgg
attatcaaggctctggagcgttcaggaggtgtgaagacccgagcagcccttgctcttggt
attacaacgaggcaactggtttatcggatggaaaagtatggaataagaggagaaggaatt
tga
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