Leptospirillum ferrooxidans: LFE_0961
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Entry
LFE_0961 CDS
T01809
Name
(GenBank) putative DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LFE_0961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lfc03021
]
LFE_0961
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_0961
Enzymes [BR:
lfc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LFE_0961
Transcription machinery [BR:
lfc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LFE_0961
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LFE_0961
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
BAM06665
UniProt:
I0IN16
LinkDB
All DBs
Position
complement(947641..948045)
Genome browser
AA seq
134 aa
AA seq
DB search
MNDLITKPIDFTPGIIDSRYRLVIAAAKRARQLMEGSKARTAHHYQKETTNAIEEILASK
VEIIYGQKALEIEQKRREALREKMKHDERFSFSRGYATEPSEVLHADLQTYTEPASDHSE
TEPEELEDSDSSED
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgaacgacctgatcacaaaaccaatagatttcacaccgggaattatcgatagccgatac
aggcttgtgattgcagcggcaaaaagggcgcgccagttgatggaggggtccaaagcccga
acagcccatcactatcaaaaagaaacaaccaatgcaattgaggagattctggcctcaaaa
gttgaaatcatatacgggcaaaaagccttagagattgaacaaaaacgcagggaagcactt
cgcgaaaaaatgaagcatgatgagcgattttccttttcaaggggttatgcaacagaacca
tctgaagtccttcacgcagatctccagacctatacagagccggcatcggatcattcggaa
acggaacctgaggaactggaggatagcgacagctcggaagattaa
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