KEGG   Leptospirillum ferrooxidans: LFE_0978
Entry
LFE_0978          CDS       T01809                                 
Symbol
ribD
Name
(GenBank) putative riboflavin biosynthesis protein
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
lfc  Leptospirillum ferrooxidans
Pathway
lfc00740  Riboflavin metabolism
lfc01100  Metabolic pathways
lfc01110  Biosynthesis of secondary metabolites
lfc01240  Biosynthesis of cofactors
lfc02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lfc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    LFE_0978 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LFE_0978 (ribD)
Enzymes [BR:lfc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     LFE_0978 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     LFE_0978 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: BAM06682
UniProt: I0IN33
LinkDB
Position
966557..967741
AA seq 394 aa
MTSPMADDEKWMNMVLSLARKGDGTVAPNPCVGAVVVSRGKLVGKGFHQRPGLAHAEVCA
LAEAGPKAMGGDLYVNLEPCCHLKKRTPPCTKEIIQSGIQRVVISTLDPNPEVSGDGVKE
LQRAGIDVSVGIFSKKAFELNRGFFSLMKNRRPFITLKGAASIDGRIATSSGDSQWISGD
RSLLLAHQLRNTHDAILVGVGTILSDDPLLTTRIPGKKTRNPVRIILDSMAKTPVNSQAV
KTISEAALWIVAGQEAPSKKIMELQSAGATVIQCQMDAMGRLDLFELMNHLVERRILTLL
VEGGGHVTGSFLSSRLVDRIRLVVAPLVIGGDDSINWVAGGDSPGMLKEAQRFSVPIRPT
RLGSDVLLSLDLWDEKTMVSGRSDKEDSDVFGDH
NT seq 1185 nt   +upstreamnt  +downstreamnt
gtgacaagtcctatggcggatgacgagaagtggatgaatatggtgctatcccttgcccgg
aaaggggacgggactgttgcaccaaatccttgtgtcggagcggttgtcgtgtcgaggggg
aaactggtcggaaaaggcttccatcagcgtcccggattggctcatgccgaagtttgtgct
ttggctgaagccgggcccaaggcgatgggaggagatctttatgtcaacctcgaaccttgt
tgccatttgaaaaaaagaacaccaccctgtacgaaggagatcatccagagcggaatacaa
cgcgtggtgatttccacactcgatccaaaccccgaggtttcaggcgatggggtgaaggag
cttcagcgggctggtattgatgtgtcggtcggtatcttttccaaaaaggcgttcgagttg
aatcggggttttttttccctgatgaagaacaggcgcccatttattaccctgaaaggcgcc
gcaagtatcgatggacgaattgcgacatcttctggagattcccagtggatttccggagat
cgctctcttcttctggcccatcagctgagaaatactcacgatgccattctcgtcggggtc
gggacaatcctttctgatgatccgcttctgacgacccgaatccccggaaagaaaacccgc
aatccggttcggatcatcctggattccatggcgaagacacctgtcaactcccaggcagtc
aagacgatttcagaagcagcgctatggatcgttgcgggtcaggaggctccctcaaaaaaa
atcatggaactccagtctgccggggcgacagtgattcagtgccagatggatgcaatgggt
cggcttgatctttttgagttgatgaaccatctggtggaacgtcgcatcctgacgcttctg
gtagagggtggtggacacgtgacaggttcattcctttccagcaggttggtggaccggatc
cgtctggtggttgctccattggtgataggtggcgatgattcaatcaactgggtcgcagga
ggagattctcccgggatgctcaaggaggcccagcgattttctgtgccgatcaggccaaca
cgtctggggtcggacgtcttgttgtcgcttgatctttgggatgaaaaaacgatggtttca
ggacgttccgacaaggaggattcagatgttttcggggatcattga

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