Leptospirillum ferrooxidans: LFE_1103
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Entry
LFE_1103 CDS
T01809
Name
(GenBank) putative peptidoglycan-binding lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
lfc
Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lfc01011
]
LFE_1103
Enzymes [BR:
lfc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
LFE_1103
Peptidoglycan biosynthesis and degradation proteins [BR:
lfc01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
LFE_1103
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GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
DUF3606
Motif
Other DBs
NCBI-ProteinID:
BAM06796
UniProt:
I0INE7
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Position
1112834..1114252
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AA seq
472 aa
AA seq
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MSKSSQARLGVLFSIAITLVAGGCSSIGSPSPKAEALTQNILPPSIPSPSPTTIDHADSL
KGVPVSPAQGGTGALLKPATPGPVVQESFLRIPDDPSIDWYTQYFQNSVHRQFRVWLERS
GRYLPYMKAIFREEGLPEDLVYLSLIESGFSPRAYSYSRAAGLWQFMSGTGKKYGLAVNG
WIDQRRDPMMSTRAAARYLKDLYNEFHSWSLAMAAYNAGEGKVANAVADAGTENYWEIRN
TRALSNETKDYVPKFIAAMRIAKDPARYGFTDIEYDDPLNLDTVKLKRPTEVKVLARAAG
VSYREFKEMNPSLTRWSTPPYMHNVPINVPKGEGDQFLASIESLPSSRRHVEYADSRRGG
HVIRSGESLWTIAHHYGVSVSSLMAANDLHSRSVLRVGQRLAIPGGGYGNVIASSRSEQG
ASNWLPHRIRRGESLFAIARRFGTSIGVIRHKNHLVHSSLLREGETIMVPAR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaaatcatcgcaggctcgtttgggggttcttttctctatcgcaattactctggtt
gccggtggatgttcttccatcgggagtccttccccaaaagccgaggccctgacacagaat
attctgcctccgtccattcccagcccgtcgccaacaaccatcgatcatgccgattcactg
aagggtgttcctgtttctcctgcccaagggggtaccggtgcgctcttgaagcctgcgact
ccgggtccggttgttcaggaatcctttttacggattccggatgatccgagcatcgactgg
tatacacagtacttccaaaattccgttcaccggcagtttcgtgtgtggctggagcgctcc
ggtcgatatcttccatacatgaaggcaatcttccgcgaggagggtctgcctgaggatctg
gtttatctctccctgattgaaagcggattcagtccgagggcctattcctattcaagggct
gccggtttatggcagttcatgtcaggaacaggcaagaagtatggtttggctgtcaacggc
tggattgaccagagacgtgacccgatgatgtccacgcgcgcggcggcccgttacttgaaa
gatctctataatgagtttcattcttggagtcttgcaatggccgcctataatgcgggtgag
gggaaggttgctaacgccgttgcggatgccggaacggagaattattgggagatccggaat
acgagagccctttcgaatgaaacaaaggattatgttcccaaattcatcgcggcaatgcgg
attgccaaggatcctgcccgttacgggtttaccgacatcgagtacgatgatccgctcaat
ctcgataccgtgaagctgaaaaggccgactgaagtgaaggtactggcaagagccgctggt
gtttcctacagggagttcaaagagatgaatccgtctctgacccgttggtcaaccccaccc
tacatgcataatgttccgatcaatgtgcccaagggcgagggagaccagtttctggcgagc
attgaaagtcttccgtcttccaggagacatgtcgagtatgcagattcaaggagaggtggc
catgtgatccgctccggagagtctctttggacgattgcccatcattatggggtctcggtg
agctccctcatggcggcaaatgatctccactctcgctctgttttgcgtgtgggacagcgt
ttggccattccaggcggaggttatgggaatgtcatcgcttcctcaaggtcagagcaaggc
gcaagcaactggttgcctcatcgcatccgaaggggtgagtccctttttgccattgcaaga
cgatttggcacaagcattggcgtcattcgccataagaatcatctggttcactcttctctt
cttcgcgaaggggaaacgatcatggttcctgccagataa
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