Leptospirillum ferrooxidans: LFE_1563
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Entry
LFE_1563 CDS
T01809
Name
(GenBank) putative uracil-DNA glycosylase, family 4
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LFE_1563
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_1563
Enzymes [BR:
lfc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LFE_1563
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LFE_1563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM07245
UniProt:
I0IPP6
LinkDB
All DBs
Position
complement(1578740..1579534)
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AA seq
264 aa
AA seq
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MRKSDGKDMDGLLVHLRYLSDLYPDLPVSKTISPKVALGKGADSSLQDQRKDLEAKVDPA
ESLPLKTPASRSEALDSLAVKVSECRACPLGDSRTNPVFGEGNFNARLLFIGEGPGAEED
RTGRPFVGRAGELLDKMIVAMGLSREEVFIANAVKCRPPSNRTPALVEREACKHFLLEQI
RIVSPEAIVLLGQTAIFQVISNESAISSVRGVETLLQDFPGIRIMPTYHPAYLLRNPQAK
AVVWKDLQQVMKWLDLPLPVLREK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaatctgatggcaaagacatggatggactcctcgtccacctgcgttatctttca
gacctctatccggatcttcccgtgtctaaaactatctctcccaaggtggctctcgggaaa
ggcgccgattcttccctgcaagatcaacgaaaagatctggaggcaaaagtcgatcctgcg
gaatccttaccacttaaaactcctgcaagtcgatccgaggcacttgattctttggctgtc
aaggtttctgagtgcagggcctgcccccttggtgattcccggaccaatccagtttttgga
gaaggaaatttcaacgccaggcttctcttcatcggtgaggggccaggggcggaagaggac
cggaccggaagaccttttgtagggagggctggagagctccttgataaaatgattgttgcg
atggggctctcaagggaggaggtctttatcgccaatgccgtcaaatgccgtccaccgtcg
aacagaaccccagctcttgttgagagggaggcttgcaaacattttctcctcgagcaaatc
aggatcgtttctcctgaagccatcgttctgctaggccaaactgcgatcttccaggtgatt
tcgaatgagtcggccatatcctcggtaaggggggttgaaacacttctgcaggattttccc
ggaatcaggatcatgccgacatatcatcccgcctatttgctcagaaatccccaggcaaag
gcagtcgtctggaaggatttgcagcaggtcatgaagtggcttgacctgccactgcccgtt
ttgagggaaaagtga
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