Leptospirillum ferrooxidans: LFE_1858
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Entry
LFE_1858 CDS
T01809
Name
(GenBank) putative pseudouridylate synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lfc
Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lfc03016
]
LFE_1858
Enzymes [BR:
lfc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LFE_1858
Transfer RNA biogenesis [BR:
lfc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LFE_1858
Prokaryotic type
LFE_1858
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
BAM07536
UniProt:
I0IQI7
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All DBs
Position
1904618..1905391
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AA seq
257 aa
AA seq
DB search
MAFITSYDGREFHGWQRQGSDQSIQGTIEEALHKLTGMPLNITGSGRTDAGVSAHGQVFH
LDIPIRGNRPWTPESLLKGVNHFLPQRIRILSATHTAQTFHARHDVERKIYRYRLRIVPQ
KQVRSPLDNPFTGVFFAPVDLSLLKSSSLLFLGNHDFTHFTVKKSLPPKTQRTIDHIFWE
RDGADYQVWITGKGFLHMMIRFIIGTIVEVANGKRTLEELEKLLQSDSPVPVKCLRPAPP
EGLSLIRVLYGKNDPFA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggctttcatcacttcctatgacggtcgggaatttcatggatggcaacggcaaggctca
gatcaatccattcaggggaccattgaagaagctctgcacaaactgaccggaatgccgctc
aacatcacaggttccggaagaacagatgccggtgtcagcgctcatgggcaggtgtttcat
cttgatattccaatcaggggaaacaggccatggacgcctgaatcactcttgaaaggagtg
aatcactttcttcctcagcggatccgaatcctgtccgccacacacacagcccaaaccttc
catgcaagacacgatgtcgagcgcaaaatctaccgctacaggctcaggattgttccccag
aaacaagtccgctctcctctggacaatccttttaccggagttttttttgctcctgtggat
ttatcacttctcaaaagctcctccttgctctttctgggaaaccatgacttcacccatttc
accgtcaaaaaatctctccctccaaaaacgcaaagaaccatagatcatatcttctgggaa
cgggatggtgctgactatcaggtctggattacggggaaagggttcctgcacatgatgatc
cgttttatcatcggaacgatcgttgaagtagccaacgggaaaagaacactagaagaactc
gaaaaacttcttcagtctgactcgccggtcccggtcaaatgccttcgtcccgccccgccg
gaagggctttccctcatccgggtgctttatggaaagaacgatccattcgcctga
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