Leptospirillum ferrooxidans: LFE_1886
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Entry
LFE_1886 CDS
T01809
Name
(GenBank) putative ATP dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc03420
Nucleotide excision repair
lfc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LFE_1886
03430 Mismatch repair
LFE_1886
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_1886
Enzymes [BR:
lfc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LFE_1886
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LFE_1886
MMR (mismatch excision repair)
Other MMR factors
LFE_1886
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_16
AAA_30
ADDB_N
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
BAM07564
UniProt:
I0IQL5
LinkDB
All DBs
Position
complement(1929513..1931798)
Genome browser
AA seq
761 aa
AA seq
DB search
MNSEDLNPEQREAVLHEGGALLVLAPAGSGKTRVVISRLLHLLEKYDLPEDRIMAVTFTR
KAAGELVSRIREARPGARLPWVGTFHAISARFLRENADRAGLPSSFTVMDGHDQRFLARN
LLKLSGVSEDEIDPKQLLTKISQWKMREETPEKLESSALFGPLRQMAVLYAAYEKRLAEN
QVLDYDDLLIRCMMLLSSDPLLRSVCQSHFAYILVDEYQDTNPVQEKLLRLFSRDLSNIT
VVGDDDQSIYRFRGADVGHIHSFPKEYRNVKRVVLRTNYRSTDSIVQVSAALISKAPKRF
EKDVVSTGIKGEPVELVRFSDERDEAESIAKRIRDHVASGGRFSDHAVLFRMNAQSGPLE
KAFSEYSIPHKVGSSGASFFDRREIRDLMAYFRILVNPHDRLSLVRILNVPSRGLGEKAQ
ERLATILPGENPTVPQLLKNFAYESNPRQAPKIVELAQILESGISRVQERCSLELTFSRL
IAEIGYREYLEGLSEGSDGGVGRTALLDELLSLAGRFDQWAKTEGVLDVASRFLEETALS
QDDSLAGDASGVSDRVSLLTIHQSKGLEFPHVVVCGMEEGILPIRGRDVTDVEEERRLFY
VAMTRASKTLSLTWCLSRQLFGRTQSARPSRFLFDLPAFGICGDIPKRQDQIGTPMRQAS
YTAGSGPFSQKTVLKKAPNASYPSPAKEKSEQVGSSFPTENRHHEKVGFRIRHARFGEGT
IVSVSGSGADRELSISFGPGNIKKMLERYANIEWLESKGAG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
gtgaattctgaagacctgaaccccgagcagagggaagcggtccttcacgaaggaggagcg
cttctggttcttgcccctgccggctcgggaaagacgcgagttgtcatctcccgtctgctt
catctcttggagaagtatgatcttccagaggaccggatcatggcggttacctttacacga
aaagctgcaggggagctggtttcccgtattcgcgaggcaagacccggagcgaggcttcca
tgggtcgggacgtttcatgcgatttctgcccgatttttaagggagaatgccgacagggcg
gggctgccttcctccttcaccgtcatggatggccatgatcaaaggtttctcgcgagaaat
cttctgaaactttcgggggtcagtgaagatgaaatcgatcccaaacagcttttaacaaaa
atcagccagtggaagatgagagaagaaactccggagaagctcgagtcttcggcacttttt
ggtccgcttcgccaaatggcggttctgtatgcagcttatgaaaaacggctcgccgagaac
caggttctcgactacgatgaccttctgatcagatgtatgatgttgctttcttcggaccct
ctcctgcgttctgtttgtcaaagtcattttgcctatattctggtcgatgagtatcaggac
acgaatcctgttcaggaaaagcttctgcgacttttttcgagagacttgtccaatataacg
gttgtcggggatgatgatcagtccatctaccgctttcggggtgccgatgttggtcatatc
cattcctttccaaaggaatacaggaatgtgaaaagagtcgttctgagaacaaattatcga
tcaaccgactcgatcgtccaggtttccgccgcactgatttcaaaagcacccaagcgtttt
gagaaggatgtcgtctcaacagggataaagggtgagccggtagaactggtgcgtttttca
gatgaacgcgatgaggcggaatccatcgccaagcgcattcgggatcatgtcgcctcgggg
gggcgcttttcggatcacgctgtgcttttcaggatgaatgcccagtctggccctcttgaa
aaagcgttttccgagtactccatcccccataaggtggggtcatccggtgccagctttttt
gatcgccgggagatccgcgatctgatggcctacttccggatccttgtgaatccgcatgat
cgtctttccctcgtccgtatcctgaatgttcccagcagaggtcttggggaaaaggcccag
gagcgactggccaccattttgcctggagagaaccccacggtcccccagcttctgaaaaat
ttcgcatacgagtccaatccgagacaggctcccaagattgtcgaactcgcccagattctt
gagtccggaatctcccgggttcaggaaaggtgttctctcgagttgaccttttcccgactg
atcgctgaaatcggataccgggaatatcttgaaggcctttccgagggaagtgatggggga
gtcgggcggacggctcttctcgacgagcttctctctttggccggaaggtttgaccaatgg
gccaaaaccgagggcgttctcgacgttgcctcccgttttctcgaagaaacagccctttcc
caggatgattcccttgcaggggatgcatcgggggtttcagacagggtcagccttctgacc
attcaccagtcaaaggggcttgagttccctcatgttgtcgtttgcgggatggaggaggga
attctcccgatccggggaagggatgtgacggatgtggaggaagaacgtcgtttgttttat
gttgcgatgacacgtgcatcgaagaccttgtccctgacctggtgcttgtcgcggcagctt
tttggtcgaacccaatcggcccgtccctcccgtttcctgtttgatcttcccgcattcggg
atatgtggagacattccaaaacggcaggatcagatcgggaccccgatgcggcaagcttcc
tacacggccgggtcgggaccattttctcaaaaaaccgttttgaaaaaagccccgaacgcg
tcctatccatcgccagccaaagaaaaatcggaacaggtcggatcttcttttccgacggaa
aatcgacaccatgaaaaagtgggtttccggattcgtcacgctcgttttggggagggaacg
attgtctctgtttcgggatcgggagcggatcgggagctgtcaatttcttttggtcctggg
aatatcaagaaaatgcttgagcgctatgccaatattgaatggctcgagtcaaaaggtgcc
ggatag
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integrated database retrieval system
