Leptospirillum ferrooxidans: LFE_1954
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Entry
LFE_1954 CDS
T01809
Symbol
radA
Name
(GenBank) putative DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
lfc
Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lfc03400
]
LFE_1954 (radA)
DNA repair and recombination proteins [BR:
lfc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LFE_1954 (radA)
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GFIT
Motif
Pfam:
ATPase
AAA_25
ChlI
DnaB_C
AAA_16
AAA_22
DUF7125
AAA_19
AAA_5
Lon_C
AAA
KdpD
NTPase_1
nSTAND3
AAA_29
GvpD_P-loop
AAA_24
Motif
Other DBs
NCBI-ProteinID:
BAM07631
UniProt:
I0IQT2
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All DBs
Position
complement(1999075..2000427)
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AA seq
450 aa
AA seq
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MGFCPNCHEAPDGLVEWVAPATRLEAIIQNEKNDQAPRSVPISEVGSRTIERIATGFSEV
DRVLGGGLVPGSFVLLGGDPGVGKSTLILQALSRIARSRKVLIAAGEESPEQIRMRYDRL
GEPSGALHLMAETDLEAVLAEVVRLSPEILVVDSIQTITMPQMGLVSGSVALLRESATLL
LEVAKKSGVTVLVIGHVTKDGQIAGPRVLEHLVDTVLYLEGERHHPLRMLRSVKNRFGPT
GELGIFEMVPEGLREVENPSSFFLEGRRPNLSGSIIVPGMEGSRPILVELQTLVNPTVFP
NPRRVAQGVSLQRLSLMTAVLSRRTGLELGGMDLFVNIVGGVDVDEPAIDLPVALSLAGS
FRNLALPSDWVVMGEIGLGGEVRRIPHLAERLKEAERHGFRHAILPGGSADSSKTKKDPL
RAGKMGGLSFHPVTELREAIDLLKDVGRKG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggattttgcccaaattgtcacgaagccccggatggtctggtcgaatgggtcgctcct
gcaactcgtcttgaggcaattatccagaatgaaaagaatgatcaggcgccccgttctgtt
ccgatctctgaagtgggtagccggacgattgaacggattgcgacagggttttccgaggtt
gaccgggtgttggggggaggtcttgttcccggctcgttcgttctcttgggaggggacccg
ggagtggggaagtccacactcatcctgcaggcattgtcccgaattgctcgttccagaaaa
gtgttgatcgctgccggggaagaatctccggagcagatacggatgcgttatgaccgtctg
ggggagccatcaggagcgcttcacctgatggcggagacagaccttgaggctgttttggct
gaagttgttcgtctttctcctgaaatccttgtcgtggattcgatccagacgattacgatg
ccccagatgggacttgtttcaggctccgtggcgcttttaagggaatcggccacacttctt
ctggaggttgccaaaaaatccggtgtaacggttcttgtcattggccatgtgacaaaagat
gggcagattgcgggacccagagttcttgaacatctggtggacacggtcctgtatcttgaa
ggggaaaggcatcaccccctgcggatgctccggtcggttaaaaaccgtttcggaccaacg
ggagaactggggattttcgagatggttccggaagggcttcgggaggtcgaaaacccctcc
tcctttttcctggagggcaggcgccccaatttgtccggatccatcattgttcctggaatg
gagggatccagaccgattctggtcgagttgcagactcttgtgaatccgacagtcttcccg
aaccccaggcgtgtcgcccaaggggtcagcctccagagactttcgctcatgactgcggta
ttgtcgaggcgaacggggcttgaacttggcgggatggatctctttgtcaatattgtggga
ggtgtcgacgtggacgagccggcgatcgatcttcccgttgcgttatcccttgcgggctcc
ttcaggaacctggctcttccttccgactgggttgtcatgggggagatcggtcttggcgga
gaggtccggcgtatcccgcatcttgccgaacgcttgaaagaagcggaaagacatggattc
cggcatgccatcctgcccggcgggtctgcggattcttccaaaaccaaaaaggaccccctt
cgtgccggaaagatgggtgggctcagttttcatccggtgacggagctccgggaggcgatt
gatttgctgaaagatgtcgggagaaaaggatga
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