Leptospirillum ferrooxidans: LFE_2112
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Entry
LFE_2112 CDS
T01809
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
lfc
Leptospirillum ferrooxidans
Pathway
lfc00300
Lysine biosynthesis
lfc00470
D-Amino acid metabolism
lfc01100
Metabolic pathways
lfc01110
Biosynthesis of secondary metabolites
lfc01120
Microbial metabolism in diverse environments
lfc01230
Biosynthesis of amino acids
Module
lfc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LFE_2112
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LFE_2112
Enzymes [BR:
lfc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LFE_2112
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
BAM07785
UniProt:
I0IR86
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All DBs
Position
complement(2158962..2160206)
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AA seq
414 aa
AA seq
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MKQFHYENGELYVESVPVEKIIREVGSPAYIYSERAISDSYASYQEAFSSHKTVIAYAMK
ANGNLSILSLLGKKGSGADVVSGGELFRAMKAGIPPDRIVFAGVGKTEQEMKEALEAGIL
MFNVESSMELDTLSKVASRMGVTANVALRVNPDVDPQTHPYISTGLKKSKFGVPVKEALA
EYLRASKLPGIRLTGIHQHIGSQLTQIAPFRDSFTRMIAFSEALKEKGIGISWLDVGGGL
GIRYDDEKVPTPGDISREILSRVKDPSQGIILEPGRSIVGNSGILVTQVLYVKKTEVKTF
YIGDAGMNDLIRPSLYGAFHDLWPIRVREGASVKADLVGPVCETGDFLVQDRDLPPIKAG
DLVSVMSAGAYGFAMASNYNARPRPPEILVSGDRFEVIRPRETYEDLIRSESAR
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgaagcagtttcattatgaaaatggtgagctctatgtagagtcggtccctgtcgagaaa
atcatccgggaggtgggatctcccgcgtatatttatagcgagcgcgccatcagcgacagc
tatgcgtcctatcaggaggctttttcatcccataaaacggtcattgcctatgcgatgaaa
gctaacggcaatctgtcgatcctttcgcttcttgggaaaaagggttcaggtgctgatgtt
gtctccggtggagaactgttccgggccatgaaggccggtataccccccgataggatcgtt
tttgccggtgtcggaaaaaccgagcaggaaatgaaagaagcccttgaggcgggaatcctg
atgttcaacgtcgaatcctccatggagctcgacactttatcgaaggtggcctcccggatg
ggcgttaccgccaacgtcgccctgagggtcaatccggatgtcgatccacaaactcatccc
tatatctccaccggactcaagaaaagcaaattcggggttccggtaaaagaggcacttgcc
gagtatctgcgcgcatcgaagcttccgggaatccgtctgaccggtatccaccagcatatc
ggctcccagttgacgcagattgctccctttcgggattcttttacgcggatgatcgctttt
tcggaagcgctcaaggaaaaagggatcgggatctcatggctggacgttggtggtggactc
gggatccgatacgatgatgaaaaggttccgacgccaggggatatcagccgggaaatcctc
tcaagggtcaaggatccctcccaggggatcatcctggagccaggaagatccattgtcgga
aactccggaattctggtgacgcaggttctctacgtcaaaaagaccgaagtaaagaccttc
tacatcggggacgcgggaatgaacgacctgatccgcccctccctctatggagccttccac
gatctttggccgattcgtgttcgtgaaggagcctccgtcaaggccgatctcgtggggcct
gtctgcgaaaccggagactttctggtccaggacagggatcttcctccgatcaaggcggga
gatctggtttcggtcatgagtgccggggcctatggttttgcgatggcctcaaactataat
gcccggccaagacctccggagattcttgtcagcggtgaccgctttgaggtcattcgtccc
cgggaaacctatgaggacctgatccgttcggagtcggcgcgttga
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