Leptospirillum ferrooxidans: LFE_2162
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Entry
LFE_2162 CDS
T01809
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
lfc
Leptospirillum ferrooxidans
Brite
KEGG Orthology (KO) [BR:
lfc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfc03019
]
LFE_2162
03009 Ribosome biogenesis [BR:
lfc03009
]
LFE_2162
Messenger RNA biogenesis [BR:
lfc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LFE_2162
Ribosome biogenesis [BR:
lfc03009
]
Prokaryotic type
rRNA processing factors
LFE_2162
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
DUF5351
Motif
Other DBs
NCBI-ProteinID:
BAM07835
UniProt:
I0IRD6
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All DBs
Position
complement(2207490..2209046)
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AA seq
518 aa
AA seq
DB search
MMQKILIHVTNEETKVALMEDNHLAEFFFERKRSAGIVGNIYKGRVGKVLPGMQAAFVDI
GLEKAAFLYVDDIFVEGSDAVPETMEIEKPVAPEVSEVPAEEQANHHEPAKKHVKKSIEE
ILVEGQEILLQLTKEPISTKGPRSTSYISLPGRYLVYMPQVNHVGVSRRITDEDERNRLK
ELVNNYRNEKGGFIIRTVAEGMTEAEAQSDMVFLELLWQDILAKSAQIKAPSLVREDLDV
VFRTIRDYLTPEVDSLIIDDRKQYERIKEFASLYLPDYADRIKFWEGEKPLFTEYDVDRQ
LSKAMEKKVWLKSGGYLVIDRAEALTVIDVNTGRFVGGNDPEETILQTNVEAVTEIARQI
RLRNVGGIIIIDFIDMEKEKNRERVFQGLQEALSRDKARTNALKISDLGLVEMSRKRVRE
DLVHLLGETCAYCEGKGYTKSLRTIIYEILEELRHVPVGSRQPGKDRKVVLYVHPDVQVA
LQEEERDFLVAVEKKINRQVIVKSDPLSHIEEFSVIAP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaaaaattttaatccatgtaacgaatgaagaaacgaaggttgcattgatggag
gacaatcatctggcagagtttttctttgaaaggaaacgttcagccggtattgtcggaaat
atatacaagggaagggttggcaaggtccttccgggaatgcaggccgcttttgtcgacatt
ggtcttgagaaggccgcttttttgtatgtggatgatatctttgtcgagggaagtgacgcg
gttccggaaaccatggagattgaaaagcctgttgctccggaagtttcggaagttcccgcc
gaggagcaggcgaatcatcatgagccggccaaaaagcatgtcaagaaatccatcgaggaa
atcctggttgaagggcaggagattcttctccagctgacaaaggagccgatcagtacaaaa
ggcccccgatcaacaagctatatcagtttgcctggtcgatatcttgtctatatgcctcag
gtcaatcatgtgggagtctcgagaaggattacggatgaggatgagcgcaatcgcctaaag
gaattggtcaacaattacaggaatgaaaagggtggattcatcattcggactgttgcagaa
ggaatgaccgaagcggaagcccagtccgacatggtcttcctcgaacttctttggcaggac
attctggcaaaaagtgcccagatcaaggctccttccttggttagggaagatctggatgtc
gttttcaggacgatcagggattatctgactccggaggtggattcccttatcattgatgat
cggaagcagtatgaacggatcaaggagtttgcatccctgtaccttccggattatgccgac
aggatcaaattttgggagggggagaagcccctctttaccgaatatgatgtcgaccggcag
ctttcaaaggctatggagaagaaggtatggctcaagtcaggcggttatctggtgattgac
agggccgaggcgctgacggtgattgacgtcaatacaggccgttttgttggcggcaatgac
ccggaagaaacgattcttcagacaaatgtcgaggctgttacagaaatcgcaagacagatc
cggctcagaaatgtgggtgggattattattatcgactttattgacatggaaaaggaaaaa
aacagggagcgcgtttttcagggattgcaggaggctctgtccagagacaaggcccgaacg
aatgcacttaagatttcggatctgggactggtggaaatgtcgagaaaacgggtcagggaa
gaccttgttcacctgttgggagagacttgtgcctactgtgaagggaaagggtatacgaaa
tccctgagaacgatcatttacgagatcctggaagaactcaggcatgttcccgtcggatca
agacagccaggaaaagatcgaaaggtggttttgtacgttcatcctgatgttcaggtggcg
cttcaggaagaagaaagggatttccttgtggctgttgagaaaaagatcaaccgtcaggtg
attgtcaagagtgatccactctcccacatagaagagttttcagtgatcgcgccctga
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