Leptospirillum ferrooxidans: LFE_2359
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Entry
LFE_2359 CDS
T01809
Name
(GenBank) putative DNA/RNA helicase, SNF2 family
Organism
lfc
Leptospirillum ferrooxidans
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
BAM08031
UniProt:
I0IRY2
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Position
complement(2438667..2442812)
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AA seq
1381 aa
AA seq
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MKDQKNLTSEEFFSSLDPLERYVLGALFLLGEVESKIKIVKILATPGLPRPSEDEPWSIE
VLERISSRLDLPRWRAGKDGWMDDNGLIALSLREIFSRPEGATLARAIRSSIVSEYQENN
AYANVSSGTFFQQLFLAFYSNNPAYFQKLLAQAERAFDASRWMAPFTNHLLETHLPAGWI
ASLDESLQRYVLMLKIDSLARRGFVTSGIESAIGHARTIVGSIEGRPLRSVLLRLGLTAG
HMSWVSRFPDIEPPSSFVVSGIRGWEAFFREEFESSALLFREMTAEYRKIVGKRKILPED
PYGLFYALSLFLLDRKSKLRQTELPRLFDLLDNGSTWSYEGYKAIMALDLSQSGLDGDAQ
ILIEDLWKRPVFEEPLSRAILSLALLILLPDKARKHKDTFFSEFLNFRDVMPLPAGIYAE
ILLRLGETSGEIEAFRKEEKIDFLLHPFLNLFPKDNAWERSLTGIESLLGEKADLEEKRE
RRIAWLLDIKRLQAFPVEQSFKKGEWRGVKPIALKRIQAQDSSLPLSEEDKAVAKTIRSY
SYGYYGKVDYATDPYDSILALVGHPALYLADSPATRIELVGSLPELVITEVKDGYRLDLS
HRSETPSVCLERLSATRYRAIELSKAFVSMGARIPNTGLLVPKEARNRVISILQQQVPFL
SVRAEITESDLPAVEGKTIPVLQIEPLDLGLAITVGVRPFGAEGHFFPAGGGGRLVNGIQ
GGKTVHVRRNLEEELSFLSRLLDSLPVLAGRPPEGQTYLLDDPEEALQLLLELQETPHPR
EIEWPKGETLKVSSPVTSKKLHLEIREARDWFDIDGKVEVDQDLVIGMKDLLSALKESRG
RFVPLGEGRFLTLTERLKSQLERFREVSEEEKGGQRVSHLGTLAIDEMLSEAGSVTGDKK
WKAFRERIRKAADYTPSLPSTLQAELRDYQLEGFLWMSRLAEWGAGACLADDMGLGKTVQ
AIAVMLDRAPSGPIIVVAPTSVCSNWSAEIARFAPSLNVHVLREAQDRISRVEGLGPLDV
LIASYGLLAMEEELLSKTSWTMAVFDEAQAFKNAETKRAQAARKIQADFRLALSGTPIEN
DLDELWSLFSAINPLLLGSRERFQSRFSGPIERGKDTRVLASLRSLVRPFMLRRTKSMVL
SELPPRTEVTIKVELPSDERVFYEALRQSALEALSSLGEEKGVQRIHILAEITKLRRALC
HPSLVDPGSLLPGAKLTAFLELSDELLKNRHKALVFSQFTGQLEQVAKALDARGISYQYL
DGSTSPKEREKRVSDFQSGKGDLFLISLRAGGTGLNLTAADYVIHLDPWWNPAVEDQASD
RAHRIGQQRPVTIYRLIATQSIEEKILDLHKRKRDLASDLLEGSEMTGRLTNEDLIALIG
I
NT seq
4146 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagaccaaaaaaatctgacttcggaagaattcttttcctctcttgacccccttgag
cgatatgttctcggagcgctcttcttgctgggagaggtggaatcaaaaataaaaatcgtc
aagattctggctacccctggtctgccacggccatcggaagatgagccatggagcattgag
gttctggagagaatcagttcccgtcttgatcttccccgctggcgagcagggaaggatggc
tggatggatgacaatgggttgatcgcattgtctcttcgggagatcttttcccgacccgaa
ggggccactcttgccagggccatccgttcgtccatcgtatcggaataccaggaaaacaat
gcctatgccaacgtttcgagcgggacgttttttcaacagctttttttggctttttactcg
aacaatccggcatatttccagaagctccttgcccaggcggagagagcctttgatgcttcc
agatggatggctcccttcacgaaccaccttttagagacccatcttcccgccggatggatc
gcctctctggacgaatcccttcagaggtatgtccttatgctcaagatcgattctcttgcc
aggaggggatttgtcacttctggaatcgagtctgccattggccatgcgcggacgatcgtg
ggctccattgaggggcgtccactccgctccgtccttctccgtcttggcttgacagccggt
cacatgtcctgggtttcccggtttcccgatatcgagcctccgtcaagctttgttgtttcc
ggaatccggggctgggaggcttttttccgtgaggagttcgagtccagcgcacttctgttc
cgggagatgactgccgaataccggaagattgttggcaaaaggaaaattcttcccgaggac
ccctacggtcttttctacgccctctctcttttccttctggacaggaaaagcaagcttcga
cagaccgaacttcccaggcttttcgatcttctggacaacgggagtacatggagctatgag
ggctacaaggcgatcatggccctggatctctcccagtccggtctcgatggagacgcgcag
attctgatcgaagatctctggaagaggcctgtttttgaagagccgctttcaagggctatt
ctgtctcttgccctcctgattctgctgcctgacaaggcccggaagcacaaggacacattt
ttttccgaatttctgaactttcgggatgtgatgccccttcctgccggcatctatgccgaa
attctcctgcggctgggagagacgtccggggagatcgaggcgttcaggaaagaggaaaaa
atcgactttcttctccatccgttcctgaatcttttcccgaaggacaacgcctgggagagg
agtctcaccggcattgaatctcttcttggggaaaaggctgatctggaggaaaaacgggag
cggaggattgcatggcttctggatatcaaacgtcttcaggcctttcctgtcgaacagagc
ttcaagaagggggagtggagaggggtcaagccgatcgccctcaagaggatccaggcccag
gattcatcccttccattatcggaagaggacaaggcggtggccaaaacaatccggagctat
tcctatggatactatggaaaggtcgattatgcgaccgatccatacgactcgattctggct
ctggtcggacacccggcactctatcttgccgacagtccagccaccaggatcgagcttgtc
ggctctcttccggaacttgtgatcaccgaggtcaaggatggataccgtctcgatctttcc
catcggagtgagactccttccgtctgtctcgaacggctctccgcaacccgctatcgggcg
atcgaactctccaaagcgtttgtttccatgggagcccggattccgaatacggggcttctg
gtcccgaaggaagcccggaaccgtgtcatttccatcctccagcaacaggtccccttcctc
tctgtgagggccgagatcaccgaatccgatcttccggcggtggaagggaaaacgattccg
gtccttcagatcgagcctctggacctgggtcttgcgatcacggtgggggtacggccattc
ggagccgaagggcacttctttccggcggggggcggagggaggcttgtcaacgggatacag
ggcggaaaaaccgttcacgtacgccggaaccttgaggaggagctgtccttcctttctcgt
cttctggattctctgccggtccttgcgggccgcccgcccgaaggtcagacctaccttctc
gacgatccggaagaggctctacagcttcttctcgaacttcaggagacgcctcatccccgg
gaaatcgaatggcccaagggggagacgctgaaggtcagttcccccgtgacctccaaaaaa
cttcatcttgagattcgtgaagccagggactggttcgacattgacggcaaggtggaggtc
gaccaggatctggtcatcgggatgaaggacctcctgtcggccctcaaggagtcccgcggt
cgatttgtccctctgggagaggggaggttcctgaccctgaccgagcggctcaaatcccag
cttgaaaggttccgtgaggtttccgaggaggaaaagggcggacagagggtcagccatctt
gggactctggcgattgatgagatgctctcggaggccgggtctgtgaccggggacaagaaa
tggaaggccttcagggaacggatccggaaagcggccgattacactccctccctcccttcg
acccttcaggccgaacttcgggattatcagctcgaagggtttctgtggatgagccggctg
gccgagtggggggcaggggcctgtctggccgacgacatggggctcgggaagacggtccag
gcgattgcggtgatgctcgaccgggccccctccggcccgattatcgttgttgcgccaacc
tcggtctgcagcaactggagtgcggagatcgcacgctttgccccctccctcaatgtccac
gtcctgagggaagcccaggacaggatctcccgcgtcgaggggcttggaccgcttgatgtc
ctgattgccagttacggactccttgccatggaggaggaactcttgtcgaagacgtcctgg
acgatggctgttttcgacgaggcccaggcgttcaagaatgccgagacaaaacgggcccag
gcggccagaaagattcaggcggattttcggctggccctttccggaacgccgatcgagaat
gatctcgatgagctgtggagtcttttcagcgcgatcaaccctcttcttctgggctccagg
gagcgtttccagtcgagattttccggccccatcgaacgggggaaggatacccgtgtcctg
gcctcccttcgttcactggtccgtccctttatgttgagaaggaccaagagcatggttctt
tcggagcttccgcccaggaccgaggtcacgatcaaggtcgagcttccctccgatgagcgt
gtcttttacgaggccctcaggcagagcgctcttgaggccctttccagtctcggagaggag
aagggggtccaacggatccatattctggcggagattaccaagctcaggcgggccctctgt
catccctcccttgtcgatccgggatcccttctgccgggagccaagcttaccgctttcctg
gagctgtcggacgaacttctgaagaatcgccacaaggcgcttgtcttcagccagttcacc
ggtcagcttgagcaggtggccaaggctctggatgccaggggaatatcctaccagtatctc
gatgggagcacttctccgaaggagcgggaaaagcgggtcagcgatttccagtccggaaag
ggagatctttttctgatcagccttcgggcgggtggaacggggctcaacctcacggctgcc
gactatgtgatccatctcgacccctggtggaatccggcggtggaggatcaggcttcagac
cgggcccaccggatcggacagcagaggccggtgaccatttaccggctgattgcgacccag
agcatcgaggaaaagatcctcgatcttcataagaggaagcgcgacctggcatccgatctc
ctggagggatcggagatgaccggccggctgacgaatgaggatctgatcgccctgatcgga
atctga
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