Ligilactobacillus faecis: QFX10_00335
Help
Entry
QFX10_00335 CDS
T08999
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lfd03019
]
QFX10_00335
03009 Ribosome biogenesis [BR:
lfd03009
]
QFX10_00335
Enzymes [BR:
lfd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QFX10_00335
Messenger RNA biogenesis [BR:
lfd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QFX10_00335
Ribosome biogenesis [BR:
lfd03009
]
Prokaryotic type
rRNA helicases
QFX10_00335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
WGN89592
LinkDB
All DBs
Position
complement(69650..70984)
Genome browser
AA seq
444 aa
AA seq
DB search
MKNFKEFNFKPFINEALAELGFTTPTEVQARLIPVIKKGKSVVGQSQTGSGKTHTFLLPI
FEKIDPTLTEVQAVITTPSRELAYQIYEAAKQLAKHSPKEILVHNYVGGTDKKRQIEKLA
HRQPQIVIGTPGRILDLMKSNALDVHNAHYLVVDEADMTLDLGFLKETDAIASALPKDLQ
MLVFSATIPQKLQPFLHKYMEAPVVEVVENKHVISKDIDNWLLSTKGRSKNQLIHQLLTL
GEPYLALVFTNTKERADELTTYLRQQGLKVAKIHGGVQPRERKRIMREIQNLEYQYVVAT
DLAARGIDIEGVSHVINDDLPEDLEFFVHRVGRTGRNGMKGIAITLYVPSEEQEIEELEQ
MGVKFVPKALKNGEIVDSYDRNRRQKRRTRKESLDPKMIGMVKKAKKKRKPGYKNKIKRA
LKRDAQQKRKIARRQERKQQRERY
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaattttaaagaattcaattttaaaccattcatcaatgaagctttagctgagtta
ggctttactactccgactgaagttcaggcacgtttgatccctgtgatcaaaaaaggaaag
agcgttgttgggcaatcccagactgggagtggaaagacgcacacatttttacttccgatc
tttgaaaagatcgatccgactttaactgaagtgcaagcagtgatcacgactccaagtcgc
gaattggcatatcagatctatgaagcagctaagcaactagcaaaacattctccaaaagag
atcttagtgcataactatgttgggggcactgataaaaaacgccaaattgaaaaattagcg
caccgtcaaccgcagatcgtgatcgggacgccaggacggatcttagatctgatgaaaagt
aacgccttagatgttcataatgctcattaccttgtcgttgatgaagctgacatgacactt
gatctaggtttcttaaaagagaccgatgcgatcgcgtcagctttaccaaaagatctgcag
atgttagtcttttcggcaacgatcccgcaaaaattacagccattcttgcataaatacatg
gaagctcctgtggtcgaagtcgtagaaaacaagcacgtgatcagtaaagatatcgataac
tggttgctttccactaaaggacgtagcaaaaatcagttgatccatcaattattgacttta
ggtgaaccatacttagctttagtatttactaatacaaaagaacgagctgacgaattgacg
acttatttacggcaacaagggctaaaagtggctaagatccatggtggtgttcaaccacgg
gaaagaaaacggatcatgcgtgagatccaaaatctagaatatcaatatgttgtagcaaca
gacttggcagctagaggaatcgatatcgaaggggtctcccatgttatcaatgatgactta
ccagaagatctagaattctttgtccaccgtgtcggacggactggacgtaacgggatgaaa
gggatcgcgatcacattgtatgtcccaagcgaagaacaagagatcgaagagttagagcaa
atgggggtcaaatttgtacctaaagctctcaaaaatggggagatcgttgactcttacgac
cgtaaccggcgacaaaagcggagaacgcgcaaagaaagtctcgatccaaagatgatcggg
atggtcaaaaaagctaagaaaaagcgcaaacctggttataagaacaagatcaaacgtgcc
ttgaaacgcgatgcccaacaaaaacgtaagatcgctcggcgccaagaaagaaaacaacaa
cgcgaacgttattaa
DBGET
integrated database retrieval system
