Ligilactobacillus faecis: QFX10_00400
Help
Entry
QFX10_00400 CDS
T08999
Name
(GenBank) RNA-guided endonuclease TnpB family protein
KO
K07496
putative transposase
Organism
lfd
Ligilactobacillus faecis
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
QFX10_00400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cas12f1-like_TNB
OrfB_IS605
HTH_OrfB_IS605
Zn_ribbon_10
DUF2564
Motif
Other DBs
NCBI-ProteinID:
WGN89605
LinkDB
All DBs
Position
complement(85809..87059)
Genome browser
AA seq
416 aa
AA seq
DB search
MKSMAKMQYHYGLKMRCYPSDQQKQLIKINSDASRFIYNEMVAIGKELMQLRRVKLPIDT
VQERIKQLTMRQNAKQMSNHYQFLEDKRIDSLAKANAIQNYRKAWNAFRKVHTAGVPKFH
RKSYRWRYQTNCQYPGQKTALLTNGTVCFLDKHHVKVPKIGRLRIAGSQARLLKRACETR
IGTVTLTKDPADRFFISMQLASDEPFVKVSKANHGHIGIDLNTDNFLTDNEGNTVPNPRY
YRTIKGKLAKEQRILSRRQRRAKKEHRSLQNSKNYQKQRLLVAKLHAKVMNQRHNFLQQI
STALIKNHDLVVAEELRSKNMLKNHALALSISDVGWRTFLGMLAYKAKLYNHQFVTVSPK
NTTQTCNDCSFIMGTNNTEKLTLADREWTCPNCGIHHIRDWNAAKNILDKGIAKLA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcaatggcgaaaatgcaatatcattatggcctgaaaatgcgttgctaccctagt
gaccaacaaaagcagttgattaaaattaacagtgacgctagtcgctttatctataacgaa
atggttgcgatcggtaaggaactgatgcaacttcgcagagttaagttaccgattgacaca
gtccaggagcgtattaagcaactaactatgcgtcaaaacgctaaacaaatgtctaatcac
tatcaatttttagaagataaacgaattgacagtttggcgaaagctaatgccattcagaac
taccgaaaagcttggaatgcctttcggaaggttcacactgctggtgttcctaaatttcat
cgaaagagttatcgctggcgttatcaaactaattgtcaatacccagggcaaaagactgcg
ttactaactaacggtacagtatgttttttagataagcaccatgttaaagtgcctaaaatt
ggtcggttacggattgcgggttctcaagcgcgcctattgaaaagagcgtgtgaaactaga
attggcacagtaactttgactaaagatccagcagatcgctttttcatatcaatgcaacta
gcttcagatgaaccttttgttaaagtgtccaaggctaatcacggacatattggaattgat
cttaatactgataatttcttaaccgataatgaaggtaacacagttcctaacccacgatat
tatcgtactattaaaggcaaattagctaaagaacagcgtattctatctagacgacaacgc
cgtgccaagaaagaacatcgctctttacagaatagtaaaaattaccaaaagcaacgcttg
ttagttgccaaactccatgccaaagtaatgaaccaaagacataattttctccaacaaatc
tctactgcactaatcaagaaccacgatttagtagtagctgaggagttgcgtagtaagaat
atgctcaagaatcatgctttagcgcttagtatttctgacgttggctggcgaacatttctc
ggcatgttggcttataaagctaagctgtataatcatcagttcgtgactgtcagcccgaaa
aatactactcaaacttgcaatgattgtagttttatcatgggaactaataacaccgagaaa
ctaaccttggctgatcgtgaatggacgtgtcctaattgcggtattcatcatattcgtgac
tggaatgcagctaagaatattctggataagggaatagctaaactagcctag
DBGET
integrated database retrieval system
