Ligilactobacillus faecis: QFX10_00990
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Entry
QFX10_00990 CDS
T08999
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
lfd
Ligilactobacillus faecis
Pathway
lfd03030
DNA replication
lfd03430
Mismatch repair
lfd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lfd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QFX10_00990
03430 Mismatch repair
QFX10_00990
03440 Homologous recombination
QFX10_00990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lfd03032
]
QFX10_00990
03400 DNA repair and recombination proteins [BR:
lfd03400
]
QFX10_00990
Enzymes [BR:
lfd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QFX10_00990
DNA replication proteins [BR:
lfd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QFX10_00990
DNA repair and recombination proteins [BR:
lfd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QFX10_00990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
WGN89691
LinkDB
All DBs
Position
196817..197353
Genome browser
AA seq
178 aa
AA seq
DB search
MNFVAIDFETANAKRSSACSLALTVVKNDQIVDELYSLIDPQMNFSPFNTKIHGITPAQV
KNAPTFAELWPHIQSFFTPEQLVIAHNAPFDCSVLKKTLEAHSLEAPSFLVLDTVKTSRN
FYQDLPDHKLNTVCARLDIELKHHHNALADSHACAQILLKQMQDFGPQQLRPFIRKYN
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcgttgcgatcgattttgaaactgctaacgctaaacgaagtagcgcttgttcc
cttgctcttaccgtcgttaaaaatgatcagatcgtcgatgaattatattcattgatcgat
ccccaaatgaatttttctccttttaacacaaagatccacgggatcacacctgctcaagta
aaaaatgcaccgacttttgctgaattatggccacatatccaaagcttttttacgccagaa
caactggtgatcgcgcataatgctccctttgattgtagtgtcttgaaaaaaacattggaa
gctcattctttagaagcgccaagtttcttagttttagatacagtcaaaacaagccgcaat
ttttatcaagatctaccagatcataaattaaatactgtttgtgcgcgtctagacattgaa
ttgaaacatcaccataatgctctagcagatagtcatgcttgtgcccagatcttattaaaa
caaatgcaggattttggaccacaacaattacgcccttttattcgtaaatataattga
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